3HO8 | pdb_00003ho8

Crystal Structure of S. aureus Pyruvate Carboxylase in complex with Coenzyme A


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth B]PYC_OADA_2nd,PYC_OADA_1ste3ho8B10 A: alpha arraysX: RuvA-CH: post-HMGL domain-like (From Topology)T: post-HMGL domain-likeF: PYC_OADA_2nd,PYC_OADA_1stECOD (1.6)
D [auth B]PYC_OADA_3rde3ho8B12 A: a+b two layersX: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related (From Homology)H: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-relatedT: a+b domain in pyruvate carboxylaseF: PYC_OADA_3rdECOD (1.6)
D [auth B]ATP-graspe3ho8B2 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: ATP-graspECOD (1.6)
D [auth B]Biotin_carb_Ce3ho8B9 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Biotin_carb_CECOD (1.6)
D [auth B]HMGL-like_2e3ho8B1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: HMGL-like_2ECOD (1.6)
D [auth B]Biotin_carb_Ne3ho8B11 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: PreATP-grasp domainF: Biotin_carb_NECOD (1.6)
CPYC_OADA_2nd,PYC_OADA_1ste3ho8C9 A: alpha arraysX: RuvA-CH: post-HMGL domain-like (From Topology)T: post-HMGL domain-likeF: PYC_OADA_2nd,PYC_OADA_1stECOD (1.6)
CPYC_OADA_3rde3ho8C12 A: a+b two layersX: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related (From Homology)H: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-relatedT: a+b domain in pyruvate carboxylaseF: PYC_OADA_3rdECOD (1.6)
CATP-graspe3ho8C2 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: ATP-graspECOD (1.6)
CBiotin_carb_Ce3ho8C10 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Biotin_carb_CECOD (1.6)
CHMGL-like_2e3ho8C1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: HMGL-like_2ECOD (1.6)
CBiotin_carb_Ne3ho8C11 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: PreATP-grasp domainF: Biotin_carb_NECOD (1.6)
B [auth D]PYC_OADA_2nde3ho8D6 A: alpha arraysX: RuvA-CH: post-HMGL domain-like (From Topology)T: post-HMGL domain-likeF: PYC_OADA_2ndECOD (1.6)
B [auth D]PYC_OADA_1ste3ho8D5 A: alpha arraysX: RuvA-CH: post-HMGL domain-like (From Topology)T: post-HMGL domain-likeF: PYC_OADA_1stECOD (1.6)
B [auth D]PYC_OADA_3rde3ho8D1 A: a+b two layersX: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related (From Homology)H: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-relatedT: a+b domain in pyruvate carboxylaseF: PYC_OADA_3rdECOD (1.6)
B [auth D]ATP-graspe3ho8D2 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: ATP-graspECOD (1.6)
B [auth D]Biotin_carb_Ce3ho8D3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Biotin_carb_CECOD (1.6)
B [auth D]HMGL-like_2e3ho8D4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: HMGL-like_2ECOD (1.6)
B [auth D]Biotin_carb_Ne3ho8D7 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: PreATP-grasp domainF: Biotin_carb_NECOD (1.6)
APYC_OADA_2nd,PYC_OADA_1ste3ho8A10 A: alpha arraysX: RuvA-CH: post-HMGL domain-like (From Topology)T: post-HMGL domain-likeF: PYC_OADA_2nd,PYC_OADA_1stECOD (1.6)
APYC_OADA_3rde3ho8A12 A: a+b two layersX: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related (From Homology)H: Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-relatedT: a+b domain in pyruvate carboxylaseF: PYC_OADA_3rdECOD (1.6)
AATP-graspe3ho8A2 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: ATP-graspECOD (1.6)
ABiotin_carb_Ce3ho8A9 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Biotin_carb_CECOD (1.6)
AHMGL-like_2e3ho8A1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: HMGL-like_2ECOD (1.6)
ABiotin_carb_Ne3ho8A11 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: PreATP-grasp domainF: Biotin_carb_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth B]3.40.50.20 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
D [auth B]3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)
D [auth B]3.10.600.10 Alpha Beta Roll pyruvate carboxylase f1077a mutant fold pyruvate carboxylase f1077a mutant domainCATH (4.3.0)
D [auth B]3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
D [auth B]1.10.472.90 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (4.3.0)
C3.40.50.20 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
C3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)
C3.10.600.10 Alpha Beta Roll pyruvate carboxylase f1077a mutant fold pyruvate carboxylase f1077a mutant domainCATH (4.3.0)
C3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C1.10.472.90 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (4.3.0)
B [auth D]3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)
B [auth D]3.10.600.10 Alpha Beta Roll pyruvate carboxylase f1077a mutant fold pyruvate carboxylase f1077a mutant domainCATH (4.3.0)
B [auth D]3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
A3.40.50.20 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
A3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)
A3.10.600.10 Alpha Beta Roll pyruvate carboxylase f1077a mutant fold pyruvate carboxylase f1077a mutant domainCATH (4.3.0)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
A1.10.472.90 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (4.3.0)