8G0H
Human PARP1 deltaV687-E688 bound to UKTT5 (compound 10) and to a DNA double strand break.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | ADP-ribosylation | 8036814 | 3001208 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Domain of poly(ADP-ribose) polymerase | 8036812 | 3000280 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | WGR domain-like | 8039231 | 3000760 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | ADP-ribosylation | 8036814 | 3001208 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Domain of poly(ADP-ribose) polymerase | 8036812 | 3000280 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | WGR domain-like | 8039231 | 3000760 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D, E [auth B] | PF00644 | Poly(ADP-ribose) polymerase catalytic domain (PARP) | Poly(ADP-ribose) polymerase catalytic domain | - | Family |
D, E [auth B] | PF02877 | Poly(ADP-ribose) polymerase, regulatory domain (PARP_reg) | Poly(ADP-ribose) polymerase, regulatory domain | Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ... | Domain |
D, E [auth B] | PF05406 | WGR domain (WGR) | WGR domain | This domain is found in a variety of polyA polymerases as well as the E. coli molybdate metabolism regulator Swiss:P33345 and other proteins of unknown function. I have called this domain WGR after the most conserved central motif of the domain. The ... | Domain |
G [auth A], H [auth C] | PF00645 | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (zf-PARP) | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | Poly(ADP-ribose) polymerase is an important regulatory component of the cellular response to DNA damage. The amino-terminal region of Poly(ADP-ribose) polymerase consists of two PARP-type zinc fingers. This region acts as a DNA nick sensor. | Domain |
G [auth A], H [auth C] | PF21728 | PADR1, N-terminal helical domain (PADR1_N) | PADR1, N-terminal helical domain | This entry represents de N-terminal helical region of PADR1 zinc-binding domain found in poly(ADP-ribose) polymerase-1 (PARP-1) from human and its homologues. The PADR1, known as the third zinc-binding domain (Zn3) localises between the N-terminal PA ... | Domain |
G [auth A], H [auth C] | PF08063 | PADR1 domain, zinc ribbon fold (Zn_ribbon_PADR1) | PADR1 domain, zinc ribbon fold | This is the zinc ribbon fold of the PADR1 domain found in poly(ADP-ribose)-polymerases, referred to as the third zinc-binding domain of these proteins [1-5]. The PADR1 domain is involved in protein-protein interactions that orchestrate PARP-1 activat ... | Domain |