9YFN | pdb_00009yfn

insect H/ACA snoRNP class III

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
H [auth J]	RNA (76-MER)	-	-	-
F [auth G]	H/ACA ribonucleoprotein complex subunit 2-like protein	RNA binding binding nucleic acid binding	-	protein-containing complex ribonucleoprotein complex
E [auth F], G [auth H]	H/ACA ribonucleoprotein complex subunit 3	RNA binding binding snoRNA binding nucleic acid binding telomerase RNA binding	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA modification biosynthetic process macromolecule modification metabolic process cellular process macromolecule metabolic process snRNA modification snRNA pseudouridine synthesis snRNA metabolic process snRNA processing RNA localization to nucleus regulation of localization regulation of biological process biological regulation positive regulation of biological process positive regulation of telomerase RNA localization to Cajal body telomerase RNA localization to Cajal body regulation of telomerase RNA localization to Cajal body localization telomerase RNA localization macromolecule localization RNA localization to Cajal body RNA localization	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex intracellular organelle cellular anatomical structure organelle lumen organelle ribonucleoprotein complex membraneless organelle nuclear lumen
B, D [auth E]	H/ACA ribonucleoprotein complex subunit	RNA binding binding snoRNA binding nucleic acid binding box H/ACA snoRNA binding	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis snoRNA guided rRNA pseudouridine synthesis primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA modification biosynthetic process macromolecule modification metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex intracellular organelle cellular anatomical structure organelle lumen organelle ribonucleoprotein complex membraneless organelle nuclear lumen
A, C [auth D]	H/ACA ribonucleoprotein complex subunit 4-like	isomerase activity pseudouridine synthase activity catalytic activity intramolecular transferase activity RNA binding binding nucleic acid binding	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA modification biosynthetic process macromolecule modification metabolic process cellular process macromolecule metabolic process snRNA modification snRNA pseudouridine synthesis snRNA metabolic process snRNA processing mRNA modification mRNA metabolic process mRNA pseudouridine synthesis box H/ACA sno(s)RNA 3'-end processing sno(s)RNA processing sno(s)RNA 3'-end processing box H/ACA sno(s)RNA processing box H/ACA sno(s)RNA metabolic process sno(s)RNA metabolic process RNA 3'-end processing	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex sno(s)RNA-containing ribonucleoprotein complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle box H/ACA snoRNP complex intracellular membrane-bounded organelle nucleolus intracellular organelle lumen box H/ACA RNP complex intracellular organelle cellular anatomical structure organelle lumen organelle ribonucleoprotein complex membraneless organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth G]	IPR050257	Large ribosomal subunit protein eL8/uL1-like	Family
F [auth G]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
F [auth G]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
F [auth G]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
E [auth F], G [auth H]	IPR007264	H/ACA ribonucleoprotein complex, subunit Nop10	Family
E [auth F], G [auth H]	IPR036756	H/ACA ribonucleoprotein complex, subunit Nop10 superfamily	Homologous Superfamily
B, D [auth E]	IPR038664	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain	Homologous Superfamily
B, D [auth E]	IPR007504	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	Family
B, D [auth E]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
A, C [auth D]	IPR015947	PUA-like superfamily	Homologous Superfamily
A, C [auth D]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
A, C [auth D]	IPR004521	Uncharacterised domain CHP00451	Domain
A, C [auth D]	IPR002501	Pseudouridine synthase II, N-terminal	Domain
A, C [auth D]	IPR032819	tRNA pseudouridylate synthase B, C-terminal	Domain
A, C [auth D]	IPR036974	PUA domain superfamily	Homologous Superfamily
A, C [auth D]	IPR012960	Dyskerin-like	Domain
A, C [auth D]	IPR002478	PUA domain	Domain
A, C [auth D]	IPR004802	tRNA pseudouridine synthase B family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.