GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3O0O designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3O0O_GDP_B_1003 | 47% | 39% | 0.209 | 0.95 | 1 | 1.36 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3O0O_GDP_A_1003 | 21% | 46% | 0.298 | 0.911 | 0.99 | 1.08 | 1 | 5 | 0 | 0 | 100% | 1 |
| 1XJE_GDP_B_1003 | 98% | 27% | 0.057 | 0.981 | 1.57 | 1.36 | 5 | 4 | 0 | 0 | 100% | 1 |
| 3O0Q_GDP_A_1003 | 93% | 49% | 0.082 | 0.975 | 0.93 | 1.02 | - | 3 | 0 | 0 | 100% | 0.99 |
| 9C3Z_GDP_B_202 | 100% | 29% | 0.018 | 0.997 | 1.51 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_B_202 | 100% | 42% | 0.02 | 0.997 | 1.26 | 1 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 40% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_B_201 | 100% | 55% | 0.018 | 0.998 | 1.08 | 0.69 | 3 | 1 | 0 | 0 | 100% | 1 |
