4IRU | pdb_00004iru


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4IRU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IRU_GDP_B_202Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IRU_GDP_B_202Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IRU_GDP_B_202Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4IRU_GDP_B_202 98% 39% 0.059 0.9811.21 1.16 3 340100%1
4IRU_GDP_D_202 98% 36% 0.058 0.9781.26 1.25 4 580100%1
4IRU_GDP_F_201 29% 39% 0.161 0.8181.23 1.15 4 240100%1
4I1O_GDP_G_202 79% 39% 0.129 0.9761.22 1.18 1 4120100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1