4YP6 | pdb_00004yp6


NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 4YP6 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP6_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP6_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP6_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YP6_NAP_C_2000 94% 55% 0.067 0.9680.85 0.9 1 200100%1
4YP6_NAP_B_2000 94% 48% 0.065 0.9640.94 1.05 1 300100%1
4YP6_NAP_A_2000 65% 57% 0.117 0.9170.77 0.9 - -00100%1
4YP5_NAP_C_2000 95% 60% 0.072 0.9750.73 0.79 - -00100%1
4YP7_NAP_C_2000 95% 60% 0.075 0.9770.67 0.85 - -00100%1
2DBQ_NAP_A_401 100% 24% 0.017 0.9981.42 1.71 7 1600100%1
2EXX_NAP_A_3698 100% 10% 0.025 0.9961.63 2.7 7 18 90100%1
2X9G_NAP_B_1269 100% 46% 0.031 0.9970.96 1.14 1 500100%1
2J8T_NAP_A_1316 100% 49% 0.033 0.9960.97 1.01 3 210100%1
4CQM_NAP_F_301 100% 49% 0.032 0.9930.8 1.17 1 420100%1