4YP7 | pdb_00004yp7


NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 4YP7 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP7_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP7_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4YP7_NAP_C_2000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YP7_NAP_C_2000 95% 60% 0.075 0.9770.67 0.85 - -00100%1
4YP7_NAP_B_2000 86% 55% 0.092 0.9620.79 0.93 - -10100%1
4YP7_NAP_A_2000 54% 57% 0.162 0.9280.73 0.91 - -10100%1
4YP5_NAP_C_2000 95% 60% 0.072 0.9750.73 0.79 - -00100%1
4YP6_NAP_C_2000 94% 55% 0.067 0.9680.85 0.9 1 200100%1
2DBQ_NAP_A_401 100% 24% 0.017 0.9981.42 1.71 7 1600100%1
2EXX_NAP_A_3698 100% 10% 0.025 0.9961.63 2.7 7 18 90100%1
2X9G_NAP_B_1269 100% 46% 0.031 0.9970.96 1.14 1 500100%1
2J8T_NAP_A_1316 100% 49% 0.033 0.9960.97 1.01 3 210100%1
3LQL_NAP_A_500 100% 43% 0.035 0.9961.13 1.07 3 410100%1