GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6EG8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6EG8_GDP_J_401 | 81% | 43% | 0.133 | 0.986 | 0.93 | 1.25 | 1 | 4 | 1 | 0 | 100% | 1 |
| 6EG8_GDP_L_401 | 79% | 43% | 0.142 | 0.989 | 0.94 | 1.27 | 1 | 4 | 3 | 0 | 100% | 1 |
| 6EG8_GDP_I_401 | 74% | 42% | 0.15 | 0.981 | 0.95 | 1.3 | 1 | 4 | 3 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 72% | 43% | 0.157 | 0.983 | 0.94 | 1.24 | 1 | 4 | 0 | 0 | 100% | 1 |
| 6AU6_GDP_A_401 | 89% | 7% | 0.102 | 0.98 | 3.48 | 1.38 | 14 | 6 | 0 | 0 | 100% | 1 |
| 7E5E_GDP_B_401 | 88% | 5% | 0.101 | 0.977 | 4.14 | 1.33 | 15 | 5 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8V3A_GDP_B_201 | 100% | 42% | 0.036 | 0.991 | 1.1 | 1.14 | 1 | 2 | 0 | 0 | 100% | 1 |
