SPM: SPERMINE
SPM is a Ligand Of Interest in 8ONO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8ONO_SPM_A_703 | 38% | 78% | 0.11 | 0.811 | 0.18 | 0.7 | - | - | 3 | 0 | 100% | 1 |
8ONO_SPM_A_701 | 11% | 75% | 0.165 | 0.681 | 0.22 | 0.73 | - | - | 0 | 0 | 100% | 1 |
8ONO_SPM_A_702 | 5% | 74% | 0.34 | 0.756 | 0.45 | 0.57 | - | - | 20 | 0 | 100% | 1 |
8ONO_SPM_A_704 | 4% | 81% | 0.229 | 0.612 | 0.32 | 0.49 | - | - | 1 | 0 | 100% | 1 |
8ONO_SPM_A_705 | 2% | 69% | 0.237 | 0.488 | 0.39 | 0.81 | - | 1 | 4 | 0 | 100% | 1 |
7YWZ_SPM_A_703 | 74% | 65% | 0.101 | 0.931 | 0.5 | 0.84 | - | - | 1 | 0 | 100% | 1 |
7YX7_SPM_A_801 | 68% | 72% | 0.107 | 0.918 | 0.41 | 0.65 | - | - | 7 | 0 | 100% | 1 |
7NE7_SPM_A_902 | 40% | 75% | 0.143 | 0.854 | 0.38 | 0.6 | - | - | 0 | 0 | 100% | 1 |
7YWS_SPM_A_701 | 27% | 68% | 0.133 | 0.776 | 0.35 | 0.88 | - | 1 | 4 | 0 | 100% | 1 |
7OB1_SPM_A_701 | 21% | 89% | 0.178 | 0.785 | 0.2 | 0.44 | - | - | 0 | 0 | 100% | 1 |
8OEX_SPM_A_101 | 96% | 74% | 0.072 | 0.982 | 0.48 | 0.54 | - | - | 0 | 0 | 100% | 1 |
6E1X_SPM_C_201 | 93% | 57% | 0.061 | 0.956 | 0.57 | 1.05 | - | - | 2 | 0 | 100% | 1 |
4MJ8_SPM_A_201 | 84% | 64% | 0.098 | 0.96 | 0.41 | 0.97 | - | - | 0 | 0 | 100% | 1 |
4MI4_SPM_A_201 | 84% | 61% | 0.096 | 0.957 | 0.73 | 0.76 | - | - | 0 | 0 | 100% | 1 |
3P4J_SPM_A_20 | 82% | 75% | 0.117 | 0.974 | 0.34 | 0.63 | - | - | 1 | 0 | 100% | 1 |