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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Burley, S.K."

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Search Summary

This query matches 1,241 Structures.

Refinements

Structure Determination Methodology

experimental (1,241)

Scientific Name of Source Organism

	Homo sapiens (176)
	Escherichia coli (48)
	Bacillus subtilis (34)
	Saccharomyces cerevisiae (29)
	Mus musculus (23)
	Bacteroides thetaiotaomicron (21)
	Pseudomonas protegens Pf-5 (18)
	Agrobacterium fabrum str. C58 (16)
	Arabidopsis thaliana (16)
	Escherichia coli K-12 (16)

More...

Taxonomy

	Bacteria (861)
	Eukaryota (280)
	Archaea (83)
	unclassified sequences (10)
	Eukaryota (eukaryotes) (8)
	Riboviria (3)
	Duplodnaviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (1,237)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (1,241)
	DNA (24)
	RNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (36)
	1.5 - 2.0 (410)
	2.0 - 2.5 (553)
	2.5 - 3.0 (218)
	3.0 - 3.5 (20)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (15)
	2000 - 2004 (189)
	2005 - 2009 (707)
	2010 - 2014 (216)
	2015 - 2019 (86)
	2020 - 2024 (26)

Enzyme Classification Name

	Hydrolases (237)
	Transferases (211)
	Lyases (76)
	Oxidoreductases (54)
	Isomerases (56)
	Ligases (22)

Membrane Protein Annotation

	OPM (7)
	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (546)
	Cyclic (612)
	Dihedral (266)
	Tetrahedral (6)

SCOP Classification

	Alpha and beta proteins (a/b) (459)
	Artifacts (319)
	Alpha and beta proteins (a+b) (225)
	All beta proteins (106)
	All alpha proteins (72)
	Multi-domain proteins (alpha and beta) (34)
	Membrane and cell surface proteins and peptides (4)
	Small proteins (4)
	Coiled coil proteins (3)
	Peptides (1)

AllSelected

1 to 25 of 1,241 Structures

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1AM9 \| pdb_00001am9	Download File View File

HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER

Parraga, A., Burley, S.K.

(1998) Structure 6: 661-672

Released	1998-07-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (STEROL REGULATORY ELEMENT BINDING PROTEIN 1A) (protein) DNA (5'-D(CPAPTPGPAPGPAPTPCPAPCPCPCPCPAPCPT PGPCPAPA)-3') (nucleic acid) DNA (5'-D(TPTPGPCPAPGPTPGPGPGPGPTPGPAPTPCPT )-3') (nucleic acid)
Unique Ligands	MG

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1AN2 \| pdb_00001an2	Download File View File

RECOGNITION BY MAX OF ITS COGNATE DNA THROUGH A DIMERIC B/HLH/Z DOMAIN

Ferre-D'Amare, A.R., Prendergast, G.C., Ziff, E.B., Burley, S.K.

(1993) Nature 363: 38-45

Released	1997-09-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	PROTEIN (TRANSCRIPTION FACTOR MAX (TF MAX)) (protein) DNA (5'-D(GPTPGPTPAPGPGPTPCPAPCPGPTPGPAPCPC PTPAPCPAPC)- 3') (nucleic acid)

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1AN4 \| pdb_00001an4	Download File View File

STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF

Ferre-D'Amare, A.R., Pognonec, P., Roeder, R.G., Burley, S.K.

(1994) EMBO J 13: 180-189

Released	1997-09-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (UPSTREAM STIMULATORY FACTOR) (protein) DNA (5'-D(CPAPCPCPCPGPGPTPCPAPCPGPTPGPGPCPC PTPAPCPA)-3') (nucleic acid) DNA (5'-D(GPTPGPTPAPGPGPCPCPAPCPGPTPGPAPCPC PGPGPGPT)-3') (nucleic acid)

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1B54 \| pdb_00001b54	Download File View File

CRYSTAL STRUCTURE OF A YEAST HYPOTHETICAL PROTEIN-A STRUCTURE FROM BNL'S HUMAN PROTEOME PROJECT

Swaminathan, S., Eswaramoorthy, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Acta Crystallogr D Biol Crystallogr 59: 127-135

Released	1999-01-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	YEAST HYPOTHETICAL PROTEIN (protein)
Unique Ligands	PLP

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1BH0 \| pdb_00001bh0	Download File View File

STRUCTURE OF A GLUCAGON ANALOG

Sturm, N.S., Lin, Y., Burley, S.K., Krstenansky, J.L., Ahn, J.-M., Azizeh, B.Y., Trivedi, D., Hruby, V.J.

(1998) J Med Chem 41: 2693-2700

Released	1998-11-04
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	GLUCAGON (protein)

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1BO4 \| pdb_00001bo4	Download File View File

CRYSTAL STRUCTURE OF A GCN5-RELATED N-ACETYLTRANSFERASE: SERRATIA MARESCENS AMINOGLYCOSIDE 3-N-ACETYLTRANSFERASE

Wolf, E., Vassilev, A., Makino, Y., Sali, A., Nakatani, Y., Burley, S.K.

(1998) Cell 94: 439-449

Released	1998-10-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Serratia marcescens
Macromolecule	PROTEIN (SERRATIA MARCESCENS AMINOGLYCOSIDE-3-N-ACETYLTRANSFERASE) (protein)
Unique Ligands	COA, SPD

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1CDW \| pdb_00001cdw	Download File View File

HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA

Nikolov, D.B., Chen, H., Halay, E.D., Hoffmann, A., Roeder, R.G., Burley, S.K.

(1996) Proc Natl Acad Sci U S A 93: 4862-4867

Released	1996-12-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (TATA BINDING PROTEIN (TBP)) (protein) DNA (5'-D(CPAPGPCPCPTPTPTPTPAPTPAPGPCPAPG)-3') (nucleic acid) DNA (5'-D(CPTPGPCPTPAPTPAPAPAPAPGPGPCPTPG)-3') (nucleic acid)

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1CI0 \| pdb_00001ci0	Download File View File

PNP OXIDASE FROM SACCHAROMYCES CEREVISIAE

Shi, W., Ostrov, D.A., Gerchman, S.E., Graziano, V., Kycia, H., Studier, B., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	1999-08-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (PNP OXIDASE) (protein)
Unique Ligands	FMN

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1CT5 \| pdb_00001ct5	Download File View File

CRYSTAL STRUCTURE OF YEAST HYPOTHETICAL PROTEIN YBL036C-SELENOMET CRYSTAL

Eswaramoorthy, S., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Acta Crystallogr D Biol Crystallogr 59: 127-135

Released	1999-09-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (YEAST HYPOTHETICAL PROTEIN, SELENOMET) (protein)
Unique Ligands	PLP

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1CVJ \| pdb_00001cvj	Download File View File

X-RAY CRYSTAL STRUCTURE OF THE POLY(A)-BINDING PROTEIN IN COMPLEX WITH POLYADENYLATE RNA

Deo, R.C., Bonanno, J.B., Sonenberg, N., Burley, S.K.

(1999) Cell 98: 835-845

Released	1999-10-04
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	POLYADENYLATE BINDING PROTEIN 1 (protein) 5'-R(APAPAPAPAPAPAPAPAPAP*A)-3' (nucleic acid)
Unique Ligands	AMP

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1DFC \| pdb_00001dfc	Download File View File

CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN

Fedorov, A.A., Fedorov, E.V., Ono, S., Matsumura, F., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) J Mol Biology 400: 589-604

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FASCIN (protein)

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1DJ8 \| pdb_00001dj8	Download File View File

CRYSTAL STRUCTURE OF E. COLI PERIPLASMIC PROTEIN HDEA

Gajiwala, K.S., Burley, S.K.

(2000) J Mol Biology 295: 605-612

Released	1999-12-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN HNS-DEPENDENT EXPRESSION A (protein)

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1DP7 \| pdb_00001dp7	Download File View File

COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE

Gajiwala, K.S., Chen, H., Cornille, F., Roques, B.P., Reith, W., Mach, B., Burley, S.K.

(2000) Nature 403: 916-921

Released	2000-03-06
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	MHC CLASS II TRANSCRIPTION FACTOR HRFX1 (protein) DNA (5'-D(CPGP(BRU)PTPAPCPCPAP(BRU)PGPGPTPAPAPCPG)-3') (nucleic acid)
Unique Ligands	EDO, PEG

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1DTJ \| pdb_00001dtj	Download File View File

CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN

Lewis, H.A., Chen, H., Edo, C., Buckanovich, R.J., Yang, Y.Y.L., Musunuru, K., Zhong, R., Darnell, R.B., Burley, S.K.

(1999) Structure 7: 191-203

Released	2000-02-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	RNA-BINDING NEUROONCOLOGICAL VENTRAL ANTIGEN 2 (protein)

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1EJ1 \| pdb_00001ej1	Download File View File

COCRYSTAL STRUCTURE OF THE MESSENGER RNA 5' CAP-BINDING PROTEIN (EIF4E) BOUND TO 7-METHYL-GDP

Marcotrigiano, J., Gingras, A.-C., Sonenberg, N., Burley, S.K.

(1997) Cell 89: 951-961

Released	2000-03-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	M7G

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1EJ4 \| pdb_00001ej4	Download File View File

COCRYSTAL STRUCTURE OF EIF4E/4E-BP1 PEPTIDE

Marcotrigiano, J., Gingras, A.-C., Sonenberg, N., Burley, S.K.

(1999) Mol Cell 3: 707-716

Released	2000-03-15
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	EUKARYOTIC INITIATION FACTOR 4E (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E BINDING PROTEIN 1 (protein)
Unique Ligands	M7G

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1EJH \| pdb_00001ejh	Download File View File

EIF4E/EIF4G PEPTIDE/7-METHYL-GDP

Marcotrigiano, J., Gingras, A.-C., Sonenberg, N., Burley, S.K.

(1999) Mol Cell 3: 707-716

Released	2000-03-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	EUKARYOTIC INITIATION FACTOR 4E (protein) EUKARYOTIC INITIATION FACTOR 4GII (protein)
Unique Ligands	M7G

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1F89 \| pdb_00001f89	Download File View File

Crystal structure of Saccharomyces cerevisiae Nit3, a member of branch 10 of the nitrilase superfamily

Kumaran, D., Eswaramoorthy, S., Studier, F.W., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Proteins 52: 283-291

Released	2001-10-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	32.5 KDA PROTEIN YLR351C (protein)

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1FI4 \| pdb_00001fi4	Download File View File

THE X-RAY CRYSTAL STRUCTURE OF MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE AT 2.3 ANGSTROM RESOLUTION.

Bonanno, J.B., Edo, C., Eswar, N., Pieper, U., Romanowski, M.J., Ilyin, V., Gerchman, S.E., Kycia, H., Studier, F.W., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2001) Proc Natl Acad Sci U S A 98: 12896-12901

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE (protein)

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1G61 \| pdb_00001g61	Download File View File

CRYSTAL STRUCTURE OF M.JANNASCHII EIF6

Groft, C.M., Beckmann, R., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2000) Nat Struct Biol 7: 1156-1164

Released	2000-11-22
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	TRANSLATION INITIATION FACTOR 6 (protein)

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1G62 \| pdb_00001g62	Download File View File

CRYSTAL STRUCTURE OF S.CEREVISIAE EIF6

Groft, C.M., Beckmann, R., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2000) Nat Struct Biol 7: 1156-1164

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	RIBOSOME ANTI-ASSOCIATION FACTOR EIF6 (protein)

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1G7R \| pdb_00001g7r	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)

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1G7S \| pdb_00001g7s	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDP

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)
Unique Ligands	GDP

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1G7T \| pdb_00001g7t	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDPNP

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)
Unique Ligands	GNP, MG