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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Cavarelli, J."

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Search Summary

This query matches 108 Structures.

Refinements

Structure Determination Methodology

experimental (108)

Scientific Name of Source Organism

	Mus musculus (64)
	Homo sapiens (15)
	Saccharomyces cerevisiae (9)
	Encephalitozoon cuniculi (5)
	Escherichia coli K-12 (4)
	Rattus norvegicus (4)
	Bean-pod mottle virus (strain Kentucky G7) (2)
	Danio rerio (2)
	Plasmodium falciparum 3D7 (2)
	Antonospora locustae (1)

More...

Taxonomy

	Eukaryota (98)
	Bacteria (9)
	Monodnaviria (2)
	Riboviria (2)
	Archaea (1)

Experimental Method

X-RAY DIFFRACTION (108)

Polymer Entity Type

	Protein (108)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (32)
	2.0 - 2.5 (53)
	2.5 - 3.0 (15)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (6)
	2005 - 2009 (10)
	2010 - 2014 (16)
	2015 - 2019 (44)
	2020 - 2024 (28)

Enzyme Classification Name

	Transferases (67)
	Ligases (7)
	Hydrolases (6)
	Oxidoreductases (2)

Symmetry Type

	Cyclic (71)
	Asymmetric (34)
	Icosahedral (2)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (28)
	Alpha and beta proteins (a+b) (10)
	All beta proteins (8)
	Artifacts (4)
	All alpha proteins (3)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 108 Structures

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1AGJ \| pdb_00001agj	Download File View File

EPIDERMOLYTIC TOXIN A FROM STAPHYLOCOCCUS AUREUS

Cavarelli, J.

(1997) Structure 5: 813-824

Released	1997-09-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	EPIDERMOLYTIC TOXIN A (protein)

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1ASY \| pdb_00001asy	Download File View File

CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASP

Ruff, M., Cavarelli, J., Rees, B., Krishnaswamy, S., Thierry, J.C., Moras, D.

(1991) Science 252: 1682-1689

Released	1995-05-08
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ASPARTYL-tRNA SYNTHETASE (protein) T-RNA (75-MER) (nucleic acid)

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1ASZ \| pdb_00001asz	Download File View File

THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTION

Cavarelli, J., Rees, B., Thierry, J.C., Moras, D.

(1994) EMBO J 13: 327-337

Released	1995-05-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ASPARTYL-tRNA SYNTHETASE (protein) T-RNA (75-MER) (nucleic acid)
Unique Ligands	ATP

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1BS2 \| pdb_00001bs2	Download File View File

YEAST ARGINYL-TRNA SYNTHETASE

Cavarelli, J., Delagouute, B., Eriani, G., Gangloff, J., Moras, D.

(1998) EMBO J 17: 5438-5448

Released	1999-08-27
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (ARGINYL-TRNA SYNTHETASE) (protein)
Unique Ligands	ARG

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1EOV \| pdb_00001eov	Download File View File

FREE ASPARTYL-TRNA SYNTHETASE (ASPRS) (E.C. 6.1.1.12) FROM YEAST

Sauter, C., Lorber, B., Cavarelli, J., Moras, D., Giege, R.

(2000) J Mol Biology 299: 1313-1324

Released	2000-09-24
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ASPARTYL-TRNA SYNTHETASE (protein)

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1F7U \| pdb_00001f7u	Download File View File

CRYSTAL STRUCTURE OF THE ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNA(ARG) AND L-ARG

Delagoutte, B., Moras, D., Cavarelli, J.

(2000) EMBO J 19: 5599-5610

Released	2001-06-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ARGINYL-TRNA SYNTHETASE (protein) TRNA(ARG) (nucleic acid)
Unique Ligands	ARG, SO4

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1F7V \| pdb_00001f7v	Download File View File

CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG

Delagoutte, B., Moras, D., Cavarelli, J.

(2000) EMBO J 19: 5599-5610

Released	2001-06-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ARGINYL-TRNA SYNTHETASE (protein) TRNA(ARG) (nucleic acid)

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1JMM \| pdb_00001jmm	Download File View File

Crystal structure of the V-region of Streptococcus mutans antigen I/II

Troffer-Charlier, N., Ogier, J., Moras, D., Cavarelli, J.

(2002) J Mol Biology 318: 179-188

Released	2002-07-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Streptococcus mutans
Macromolecule	protein I/II V-region (protein)
Unique Ligands	NA

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1PGL \| pdb_00001pgl	Download File View File

BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT

Lin, T., Cavarelli, J., Johnson, J.E.

(2003) Virology 314: 26-33

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bean-pod mottle virus (strain Kentucky G7)
Macromolecule	BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT (protein) BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT (protein) 5'-R(APGPUPCPUPC)-3' (nucleic acid)

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1PGW \| pdb_00001pgw	Download File View File

BEAN POD MOTTLE VIRUS (BPMV), TOP COMPONENT

Lin, T., Cavarelli, J., Johnson, J.E.

(2003) Virology 314: 26-33

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bean-pod mottle virus (strain Kentucky G7)
Macromolecule	BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT (protein) BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT (protein)

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1YZ1 \| pdb_00001yz1	Download File View File

Crystal structure of human translationally controlled tumour associated protein

Cavarelli, J., Moras, D., Amson, R., Telerman, A.

(2008) Cell Death Differ 15: 1211-1220

Released	2006-05-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Translationally controlled tumor protein (protein)

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2J49 \| pdb_00002j49	Download File View File

Crystal structure of yeast TAF5 N-terminal domain

Romier, C., James, N., Birck, C., Cavarelli, J., Vivares, C., Collart, M.A., Moras, D.

(2007) J Mol Biology 368: 1292

Released	2007-04-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 5 (protein)

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2J4B \| pdb_00002j4b	Download File View File

Crystal structure of Encephalitozoon cuniculi TAF5 N-terminal domain

Romier, C., James, N., Birck, C., Cavarelli, J., Vivares, C., Collart, M.A., Moras, D.

(2007) J Mol Biology 368: 1292

Released	2007-04-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Encephalitozoon cuniculi
Macromolecule	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 72/90-100 KDA (protein)

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2OQB \| pdb_00002oqb	Download File View File

Crystal structure of the N-terminal domain of coactivator-associated methyltransferase 1 (CARM1)

Cavarelli, J.

(2007) EMBO J 26: 4391-4401

Released	2007-10-30
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Rattus norvegicus
Macromolecule	Histone-arginine methyltransferase CARM1 (protein)
Unique Ligands	CL

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2QEN \| pdb_00002qen	Download File View File

The walker-type atpase paby2304 of pyrococcus abyssi

Uhring, M., Bey, G., Lecompte, O., Moras, D., Poch, O., Cavarelli, J.

To be published

Released	2008-07-01
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Pyrococcus abyssi
Macromolecule	WALKER-TYPE ATPASE (protein)
Unique Ligands	ADP, MG

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2XP1 \| pdb_00002xp1	Download File View File

Structure of the tandem SH2 domains from Antonospora locustae transcription elongation factor Spt6

Diebold, M.-L., Koch, M., Cavarelli, J., Romier, C.

(2010) J Biological Chem 285: 38389

Released	2010-09-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Antonospora locustae
Macromolecule	SPT6 (protein)
Unique Ligands	CL, SO4

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2XPL \| pdb_00002xpl	Download File View File

Crystal structure of Iws1(Spn1) conserved domain from Encephalitozoon cuniculi

Koch, M., Diebold, M.-L., Cura, V., Cavarelli, J., Romier, C.

(2010) EMBO J 29: 3979

Released	2010-11-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Encephalitozoon cuniculi
Macromolecule	IWS1 (protein)
Unique Ligands	CL

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2XPN \| pdb_00002xpn	Download File View File

Crystal structure of a Spt6-Iws1(Spn1) complex from Encephalitozoon cuniculi, Form I

Diebold, M.-L., Koch, M., Cura, V., Cavarelli, J., Romier, C.

(2010) EMBO J 29: 3979

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Encephalitozoon cuniculi
Macromolecule	CHROMATIN STRUCTURE MODULATOR (protein) IWS1 (protein)
Unique Ligands	BR

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2XPO \| pdb_00002xpo	Download File View File

Crystal structure of a Spt6-Iws1(Spn1) complex from Encephalitozoon cuniculi, Form II

Diebold, M.-L., Koch, M., Cura, V., Moras, D., Cavarelli, J., Romier, C.

(2010) EMBO J 29: 3979

Released	2010-11-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Encephalitozoon cuniculi
Macromolecule	CHROMATIN STRUCTURE MODULATOR (protein) IWS1 (protein)
Unique Ligands	CL

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2XPP \| pdb_00002xpp	Download File View File

Crystal structure of a Spt6-Iws1(Spn1) complex from Encephalitozoon cuniculi, Form III

Diebold, M.-L., Koch, M., Cura, V., Cavarelli, J., Romier, C.

(2010) EMBO J 29: 3979

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Encephalitozoon cuniculi
Macromolecule	CHROMATIN STRUCTURE MODULATOR (protein) IWS1 (protein)

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3B3F \| pdb_00003b3f	Download File View File

The 2.2 A crystal structure of the catalytic domain of coactivator-associated arginine methyl transferase I(CARM1,142-478), in complex with S-adenosyl homocysteine

Troffer-Charlier, N., Cura, V., Hassenboehler, P., Moras, D., Cavarelli, J.

(2007) EMBO J 26: 4391-4401

Released	2007-11-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rattus norvegicus
Macromolecule	Histone-arginine methyltransferase CARM1 (protein)
Unique Ligands	SAH

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3B3G \| pdb_00003b3g	Download File View File

The 2.4 A crystal structure of the apo catalytic domain of coactivator-associated arginine methyl transferase I(CARM1,140-480).

Troffer-Charlier, N., Cura, V., Hassenboehler, P., Moras, D., Cavarelli, J.

(2007) EMBO J 26: 4391-4401

Released	2007-11-06
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rattus norvegicus
Macromolecule	Histone-arginine methyltransferase CARM1 (protein)

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3B3J \| pdb_00003b3j	Download File View File

The 2.55 A crystal structure of the apo catalytic domain of coactivator-associated arginine methyl transferase I(CARM1:28-507, residues 28-146 and 479-507 not ordered)

Troffer-Charlier, N., Cura, V., Hassenboehler, P., Moras, D., Cavarelli, J.

(2007) EMBO J 26: 4391-4401

Released	2007-11-06
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Rattus norvegicus
Macromolecule	Histone-arginine methyltransferase CARM1 (protein)
Unique Ligands	BEN

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3DGP \| pdb_00003dgp	Download File View File

Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2

Kainov, D.E., Cavarelli, J., Egly, J.M., Poterszman, A.

(2008) Nat Struct Mol Biol 15: 980-984

Released	2008-08-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	RNA polymerase II transcription factor B subunit 2 (protein) RNA polymerase II transcription factor B subunit 5 (protein)

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3DOM \| pdb_00003dom	Download File View File

Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2

Kainov, D.E., Cavarelli, J., Egly, J.M., Poterszman, A.

(2008) Nat Struct Mol Biol 15: 980-984

Released	2008-08-19
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	RNA polymerase II transcription factor B subunit 2 (protein) RNA polymerase II transcription factor B subunit 5 (protein)

1 to 25 of 108 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AGJ | pdb_00001agj

1ASY | pdb_00001asy

1ASZ | pdb_00001asz

1BS2 | pdb_00001bs2

1EOV | pdb_00001eov

1F7U | pdb_00001f7u

1F7V | pdb_00001f7v

1JMM | pdb_00001jmm

1PGL | pdb_00001pgl

1PGW | pdb_00001pgw

1YZ1 | pdb_00001yz1

2J49 | pdb_00002j49

2J4B | pdb_00002j4b

2OQB | pdb_00002oqb

2QEN | pdb_00002qen

2XP1 | pdb_00002xp1

2XPL | pdb_00002xpl

2XPN | pdb_00002xpn

2XPO | pdb_00002xpo

2XPP | pdb_00002xpp

3B3F | pdb_00003b3f

3B3G | pdb_00003b3g

3B3J | pdb_00003b3j

3DGP | pdb_00003dgp

3DOM | pdb_00003dom