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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "New York SGX Research Center for Structural Genomics (NYSGXRC)"

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Search Summary

This query matches 1,041 Structures.

Refinements

Structure Determination Methodology

experimental (1,041)

Scientific Name of Source Organism

	Escherichia coli (47)
	Homo sapiens (35)
	Bacillus subtilis (34)
	Saccharomyces cerevisiae (23)
	Bacteroides thetaiotaomicron (21)
	Agrobacterium fabrum str. C58 (16)
	Escherichia coli K-12 (16)
	Pseudomonas aeruginosa (15)
	Pseudomonas protegens Pf-5 (15)
	Vibrio cholerae (15)

More...

Taxonomy

	Bacteria (843)
	Eukaryota (107)
	Archaea (79)
	unclassified sequences (10)
	Duplodnaviria (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (1,037)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (1,041)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (33)
	1.5 - 2.0 (352)
	2.0 - 2.5 (448)
	2.5 - 3.0 (187)
	3.0 - 3.5 (17)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (144)
	2005 - 2009 (694)
	2010 - 2014 (200)

Enzyme Classification Name

	Hydrolases (155)
	Transferases (156)
	Lyases (73)
	Oxidoreductases (54)
	Isomerases (50)
	Ligases (20)

Membrane Protein Annotation

	OPM (6)
	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (580)
	Asymmetric (405)
	Dihedral (230)
	Tetrahedral (6)

SCOP Classification

	Alpha and beta proteins (a/b) (437)
	Artifacts (285)
	Alpha and beta proteins (a+b) (178)
	All beta proteins (75)
	All alpha proteins (55)
	Multi-domain proteins (alpha and beta) (10)
	Membrane and cell surface proteins and peptides (4)
	Small proteins (3)
	Coiled coil proteins (2)

AllSelected

1 to 25 of 1,041 Structures

Page 1 of 42

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1B54 \| pdb_00001b54	Download File View File

CRYSTAL STRUCTURE OF A YEAST HYPOTHETICAL PROTEIN-A STRUCTURE FROM BNL'S HUMAN PROTEOME PROJECT

Swaminathan, S., Eswaramoorthy, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Acta Crystallogr D Biol Crystallogr 59: 127-135

Released	1999-01-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	YEAST HYPOTHETICAL PROTEIN (protein)
Unique Ligands	PLP

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1CI0 \| pdb_00001ci0	Download File View File

PNP OXIDASE FROM SACCHAROMYCES CEREVISIAE

Shi, W., Ostrov, D.A., Gerchman, S.E., Graziano, V., Kycia, H., Studier, B., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	1999-08-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (PNP OXIDASE) (protein)
Unique Ligands	FMN

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1CT5 \| pdb_00001ct5	Download File View File

CRYSTAL STRUCTURE OF YEAST HYPOTHETICAL PROTEIN YBL036C-SELENOMET CRYSTAL

Eswaramoorthy, S., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Acta Crystallogr D Biol Crystallogr 59: 127-135

Released	1999-09-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (YEAST HYPOTHETICAL PROTEIN, SELENOMET) (protein)
Unique Ligands	PLP

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1DFC \| pdb_00001dfc	Download File View File

CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN

Fedorov, A.A., Fedorov, E.V., Ono, S., Matsumura, F., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) J Mol Biology 400: 589-604

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FASCIN (protein)

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1F89 \| pdb_00001f89	Download File View File

Crystal structure of Saccharomyces cerevisiae Nit3, a member of branch 10 of the nitrilase superfamily

Kumaran, D., Eswaramoorthy, S., Studier, F.W., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2003) Proteins 52: 283-291

Released	2001-10-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	32.5 KDA PROTEIN YLR351C (protein)

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1FI4 \| pdb_00001fi4	Download File View File

THE X-RAY CRYSTAL STRUCTURE OF MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE AT 2.3 ANGSTROM RESOLUTION.

Bonanno, J.B., Edo, C., Eswar, N., Pieper, U., Romanowski, M.J., Ilyin, V., Gerchman, S.E., Kycia, H., Studier, F.W., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2001) Proc Natl Acad Sci U S A 98: 12896-12901

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE (protein)

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1G61 \| pdb_00001g61	Download File View File

CRYSTAL STRUCTURE OF M.JANNASCHII EIF6

Groft, C.M., Beckmann, R., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2000) Nat Struct Biol 7: 1156-1164

Released	2000-11-22
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	TRANSLATION INITIATION FACTOR 6 (protein)

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1G62 \| pdb_00001g62	Download File View File

CRYSTAL STRUCTURE OF S.CEREVISIAE EIF6

Groft, C.M., Beckmann, R., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2000) Nat Struct Biol 7: 1156-1164

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	RIBOSOME ANTI-ASSOCIATION FACTOR EIF6 (protein)

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1HQZ \| pdb_00001hqz	Download File View File

Cofilin homology domain of a yeast actin-binding protein ABP1P

Strokopytov, B.V., Fedorov, A.A., Mahoney, N., Drubin, D.G., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2005) Acta Crystallogr D Biol Crystallogr 61: 285-293

Released	2001-12-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ACTIN-BINDING PROTEIN (protein)

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1I9A \| pdb_00001i9a	Download File View File

STRUCTURAL STUDIES OF CHOLESTEROL BIOSYNTHESIS: MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE AND ISOPENTENYL DIPHOSPHATE ISOMERASE

(2001) Proc Natl Acad Sci U S A 98: 12896-12901

Released	2001-03-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE (protein)
Unique Ligands	MN

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1JD1 \| pdb_00001jd1	Download File View File

Crystal Structure of YEO7_yeast

Deaconescu, A.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Proteins 48: 431-436

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HYPOTHETICAL 13.9 KDA PROTEIN IN FCY2-PET117 INTERGENIC REGION (protein)

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1JF9 \| pdb_00001jf9	Download File View File

Crystal Structure of selenocysteine lyase

Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) J Mol Biology 315: 1199-1208

Released	2001-07-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	SELENOCYSTEINE LYASE (protein)
Unique Ligands	PLP

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1JFI \| pdb_00001jfi	Download File View File

Crystal Structure of the NC2-TBP-DNA Ternary Complex

Kamada, K., Shu, F., Chen, H., Malik, S., Stelzer, G., Roeder, R.G., Meisterernst, M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2001) Cell 106: 71-81

Released	2001-07-11
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Homo sapiens
Macromolecule	TATA-BOX-BINDING PROTEIN (TBP) (protein) Transcription Regulator NC2 alpha chain (protein) Transcription Regulator NC2 beta chain (protein) 5'-D(GGPAPGPCPCPCPTPTPTPTPAPTPAPGPCPCPAPA)-3' (nucleic acid) 5'-D(TPTPGPGPCPTPAPTPAPAPAPAPGPGPGPCPTPCPC)-3' (nucleic acid)

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1JG8 \| pdb_00001jg8	Download File View File

Crystal Structure of Threonine Aldolase (Low-specificity)

Kielkopf, C.L., Bonanno, J., Ray, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermotoga maritima
Macromolecule	L-allo-threonine aldolase (protein)
Unique Ligands	CA, NA

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1JR7 \| pdb_00001jr7	Download File View File

CRYSTAL STRUCTURE OF GAB REVEALS OXIDOREDUCTASE FOLD

Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Protein Sci 11: 723-738

Released	2001-08-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION (protein)
Unique Ligands	FE2

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1JSS \| pdb_00001jss	Download File View File

Crystal structure of the Mus musculus cholesterol-regulated START protein 4 (StarD4).

Romanowski, M.J., Soccio, R.E., Breslow, J.L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Proc Natl Acad Sci U S A 99: 6949-6954

Released	2002-04-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	cholesterol-regulated START protein 4 (protein)

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1JSX \| pdb_00001jsx	Download File View File

Crystal Structure of the Escherichia coli Glucose-Inhibited Division Protein B (GidB)

Romanowski, M.J., Bonanno, J.B., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Proteins 47: 563-567

Released	2002-05-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Glucose-inhibited division protein B (protein)

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1JYH \| pdb_00001jyh	Download File View File

Crystal Structure of the Escherichia coli SbmC protein (AKA Gyrase Inhibitory Protein GyrI, AKA YeeB)

Romanowski, M.J., Gibney, S.A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Proteins 47: 403-407

Released	2002-04-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	DNA Gyrase inhibitory protein (protein)

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1JZT \| pdb_00001jzt	Download File View File

Crystal structure of yeast ynu0, YNL200c

Jiang, J.-S., Manning, N.O., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2001-09-26
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Hypothetical 27.5 kDa protein in SPX19-GCR2 intergenic region (protein)
Unique Ligands	CL