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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Shukla, P.K."

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Search Summary

This query matches 46 Structures.

Refinements

Structure Determination Methodology

experimental (46)

Scientific Name of Source Organism

	Bos taurus (21)
	Daboia russelii pulchella (11)
	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (3)
	Naja sagittifera (2)
	Saccharomyces cerevisiae S288C (2)
	Acinetobacter baumannii (1)
	Bubalus bubalis (1)
	Camelus dromedarius (1)
	Escherichia coli K-12 (1)
	Leishmania donovani (1)

More...

Taxonomy

	Eukaryota (41)
	Bacteria (5)

Experimental Method

X-RAY DIFFRACTION (46)

Polymer Entity Type

Protein (46)

Refinement Resolution (Å)

	1.0 - 1.5 (9)
	1.5 - 2.0 (16)
	2.0 - 2.5 (7)
	2.5 - 3.0 (11)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)

Release Date

	2010 - 2014 (41)
	2015 - 2019 (3)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (37)
	Transferases (3)
	Lyases (3)

Symmetry Type

	Asymmetric (40)
	Cyclic (6)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (10)
	All alpha proteins (10)

AllSelected

1 to 25 of 46 Structures

Page 1 of 2

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Explore in 3D

3O97 \| pdb_00003o97	Download File View File

Crystal Structure of the complex of C-lobe of lactoferrin with indole acetic acid at 2.68 A Resolution

Shukla, P.K., Sinha, M., Bhushan, A., Vikram, G., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-09-08
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, IAC, NAG, SO4, ZN
Unique branched monosaccharides	NAG

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3OSH \| pdb_00003osh	Download File View File

Crystal Structure of The Complex of Group 1 Phospholipase A2 With Atropin At 1.5 A Resolution

Shukla, P.K., Kaushik, S., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Naja sagittifera
Macromolecule	Phospholipase A2 isoform 3 (protein)
Unique Ligands	CA, OIN

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3PTL \| pdb_00003ptl	Download File View File

Crystal structure of proteinase K inhibited by a lactoferrin nonapeptide, Lys-Gly-Glu-Ala-Asp-Ala-Leu-Ser-Leu-Asp at 1.3 A resolution.

Shukla, P.K., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Parengyodontium album
Macromolecule	10-mer peptide from Lactoferrin (protein) Proteinase K (protein)

Explore in 3D

3Q4Y \| pdb_00003q4y	Download File View File

Crystal structure of group I phospholipase A2 at 2.3 A resolution in 40% ethanol revealed the critical elements of hydrophobicity of the substrate-binding site

Shukla, P.K., Kaushik, S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-01-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Naja sagittifera
Macromolecule	Phospholipase A2 isoform 3 (protein)
Unique Ligands	CA, EOH

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3QV4 \| pdb_00003qv4	Download File View File

Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with dipeptide L-ALA D-GLU at 2.7 A resolution

Shukla, P.K., Sharma, P., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-03-30
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Camelus dromedarius
Macromolecule	Peptidoglycan recognition protein 1 (protein)
Unique Ligands	ALA, DGL, EDO, GOL, PEG, SRT
Unique branched monosaccharides	NAG

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3RGY \| pdb_00003rgy	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Lipopolysaccharide at 2.0 A Resolution

Shukla, P.K., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-05-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, LP5, NAG, SO4, ZN
Unique branched monosaccharides	BMA, NAG

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3SDF \| pdb_00003sdf	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Lipoteichoic acid at 2.1 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-06-29
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, LTC, NAG, SO4, ZN
Unique branched monosaccharides	BMA, NAG

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3TCE \| pdb_00003tce	Download File View File

Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 5-Hydroxylysine at 2.6 A resolution

Shukla, P.K., Kaushik, S., Sinha, M., Kaur, P., Tewari, R., Sharma, S., Singh, T.P.

To be published

Released	2011-08-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Macromolecule	Dihydrodipicolinate synthase (protein)
Unique Ligands	LYZ

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3TOD \| pdb_00003tod	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with 1-Butyl-1H-Pyrazole-5-carboxylic acid at 1.38 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein) peptide, LEACAF from Lactotransferrin (protein)
Unique Ligands	CO3, EOH, FE, GOL, SO4, XXB, ZN
Unique branched monosaccharides	NAG

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3TUS \| pdb_00003tus	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Meta-hydroxy benzoic acid at 2.5 A Resolution

Shukla, P.K., Gautam, L., Singh, A., Kaushik, S., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-10-19
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	3HB, CO3, FE, NAG, SO4, ZN
Unique branched monosaccharides	NAG

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3U72 \| pdb_00003u72	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Isoniazid at 2.2 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-11-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide of Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, ISZ, NAG, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

3U8Q \| pdb_00003u8q	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Phenyl-Propanolamine at 1.97 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-11-16
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide of Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, NAG, NPU, SO4, ZN
Unique branched monosaccharides	NAG

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3UGW \| pdb_00003ugw	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Deoxycytidine at 1.87 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-11-16
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, DCZ, FE, GOL, NAG, SO4, ZN
Unique branched monosaccharides	NAG

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3UK4 \| pdb_00003uk4	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with 1,2,5-Pentanetriol at 1.98 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-11-23
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, NAG, SO4, XXD, ZN
Unique branched monosaccharides	NAG

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3USD \| pdb_00003usd	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Imidazol (1,2 a) pyridine3-yl-acitic acid at 2.4 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide of Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, IDL, NAG, SO4, ZN
Unique branched monosaccharides	BMA, NAG

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3V5A \| pdb_00003v5a	Download File View File

Crystal Structure of C-lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2011-12-28
Method	X-RAY DIFFRACTION 1.44 Å
Organisms	Bos taurus
Macromolecule	C-TERMINAL PEPTIDE OF LACTOTRANSFERRIN (protein) Lactotransferrin (protein)
Unique Ligands	ABU, CO3, FE, GOL, NAG, ZN
Unique branched monosaccharides	NAG

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3VDF \| pdb_00003vdf	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-01-18
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Bos taurus
Macromolecule	C-TERMINAL PEPTIDE OF LACTOTRANSFERRIN (protein) Lactotransferrin (protein)
Unique Ligands	API, CO3, FE, NAG, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

4DIG \| pdb_00004dig	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with N-acetylmuramyl l-alanyl d-isoglutamine at 1.8 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-02-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	ALA, CO3, DGN, FE, LAC, NAG, NDG, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

4DXU \| pdb_00004dxu	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with aminocaproic acid at 1.46 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Bos taurus
Macromolecule	C-TERMINAL PEPTIDE OF Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	ACA, CO3, FE, NAG, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

4EIX \| pdb_00004eix	Download File View File

Structural Studies of the ternary complex of Phaspholipase A2 with nimesulide and indomethacin

Shukla, P.K., Singh, N., Kumar, S., Bhushan, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-04-25
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Daboia russelii pulchella
Macromolecule	Phospholipase A2 VRV-PL-VIIIa (protein)
Unique Ligands	CCN, IMN, NIM

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4FGA \| pdb_00004fga	Download File View File

Design of peptide inhibitors of group II phospholipase A2: Crystal structure of the complex of phospholipsae A2 with a designed tripeptide, Ala- Tyr- Lys at 2.3 A resolution

Shukla, P.K., Sinha, M., Dey, S., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-06-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Daboia russelii pulchella
Macromolecule	AYK (protein) Phospholipase A2 VRV-PL-VIIIa (protein)

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4FIM \| pdb_00004fim	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with celecoxib acid at 1.80 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-06-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CEL, CO3, FE, GOL, ZN
Unique branched monosaccharides	NAG

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4FJP \| pdb_00004fjp	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Naproxen at 1.68 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-06-27
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, NAG, NPS, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

4FOR \| pdb_00004for	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Flurbiprofen at 1.58 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-07-04
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, FLP, GOL, NAG, SO4, ZN
Unique branched monosaccharides	NAG

Explore in 3D

4G2Z \| pdb_00004g2z	Download File View File

Crystal Structure of C-lobe of Bovine lactoferrin Complexed with Mefenamic acid at 1.90 A Resolution

Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	C-terminal peptide from Lactotransferrin (protein) Lactotransferrin (protein)
Unique Ligands	CO3, FE, ID8, NAG, SO4, ZN
Unique branched monosaccharides	NAG

1 to 25 of 46 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3O97 | pdb_00003o97

3OSH | pdb_00003osh

3PTL | pdb_00003ptl

3Q4Y | pdb_00003q4y

3QV4 | pdb_00003qv4

3RGY | pdb_00003rgy

3SDF | pdb_00003sdf

3TCE | pdb_00003tce

3TOD | pdb_00003tod

3TUS | pdb_00003tus

3U72 | pdb_00003u72

3U8Q | pdb_00003u8q

3UGW | pdb_00003ugw

3UK4 | pdb_00003uk4

3USD | pdb_00003usd

3V5A | pdb_00003v5a

3VDF | pdb_00003vdf

4DIG | pdb_00004dig

4DXU | pdb_00004dxu

4EIX | pdb_00004eix

4FGA | pdb_00004fga

4FIM | pdb_00004fim

4FJP | pdb_00004fjp

4FOR | pdb_00004for

4G2Z | pdb_00004g2z