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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Structural GenomiX"

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Search Summary

This query matches 74 Structures.

Refinements

Structure Determination Methodology

experimental (74)

Scientific Name of Source Organism

	Escherichia coli (23)
	Bacillus subtilis (11)
	Haemophilus influenzae (8)
	Thermotoga maritima (8)
	Archaeoglobus fulgidus (5)
	Campylobacter jejuni (4)
	Deinococcus radiodurans (3)
	Vibrio cholerae (3)
	Homo sapiens (2)
	Neisseria gonorrhoeae (2)

More...

Taxonomy

	Bacteria (66)
	Archaea (6)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (74)

Polymer Entity Type

Protein (74)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (35)
	2.0 - 2.5 (22)
	2.5 - 3.0 (14)
	3.0 - 3.5 (1)

Release Date

2000 - 2004 (74)

Enzyme Classification Name

	Transferases (31)
	Hydrolases (16)
	Lyases (10)
	Isomerases (6)
	Oxidoreductases (4)

Symmetry Type

	Cyclic (50)
	Asymmetric (29)
	Dihedral (9)
	Tetrahedral (3)

SCOP Classification

	Artifacts (43)
	Alpha and beta proteins (a/b) (50)
	Alpha and beta proteins (a+b) (19)
	All beta proteins (8)
	All alpha proteins (2)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 74 Structures

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1O60 \| pdb_00001o60	Download File View File

Crystal structure of KDO-8-phosphate synthase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Haemophilus influenzae
Macromolecule	2-dehydro-3-deoxyphosphooctonate aldolase (protein)

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1O61 \| pdb_00001o61	Download File View File

Crystal structure of a PLP-dependent enzyme with PLP

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Campylobacter jejuni
Macromolecule	aminotransferase (protein)
Unique Ligands	ACT, PLP

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1O62 \| pdb_00001o62	Download File View File

Crystal structure of the apo form of a PLP-dependent enzyme

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Campylobacter jejuni
Macromolecule	aminotransferase (protein)
Unique Ligands	ACT, BME

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1O63 \| pdb_00001o63	Download File View File

Crystal structure of an ATP phosphoribosyltransferase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermotoga maritima
Macromolecule	ATP phosphoribosyltransferase (protein)

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1O64 \| pdb_00001o64	Download File View File

Crystal structure of an ATP phosphoribosyltransferase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermotoga maritima
Macromolecule	ATP phosphoribosyltransferase (protein)
Unique Ligands	PO4

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1O65 \| pdb_00001o65	Download File View File

Crystal structure of an hypothetical protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Escherichia coli
Macromolecule	Hypothetical protein yiiM (protein)

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1O66 \| pdb_00001o66	Download File View File

Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	3-methyl-2-oxobutanoate hydroxymethyltransferase (protein)
Unique Ligands	GOL

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1O67 \| pdb_00001o67	Download File View File

Crystal structure of an hypothetical protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Escherichia coli
Macromolecule	Hypothetical protein yiiM (protein)

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1O68 \| pdb_00001o68	Download File View File

Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Neisseria meningitidis serogroup B
Macromolecule	3-methyl-2-oxobutanoate hydroxymethyltransferase (protein)
Unique Ligands	KIV, NA

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1O69 \| pdb_00001o69	Download File View File

Crystal structure of a PLP-dependent enzyme

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Campylobacter jejuni
Macromolecule	aminotransferase (protein)
Unique Ligands	BME, X04

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1O6B \| pdb_00001o6b	Download File View File

Crystal structure of phosphopantetheine adenylyltransferase with ADP

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus subtilis
Macromolecule	Phosphopantetheine adenylyltransferase (protein)
Unique Ligands	ADP, CL, MG, PO4

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1O6C \| pdb_00001o6c	Download File View File

Crystal structure of UDP-N-acetylglucosamine 2-epimerase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bacillus subtilis
Macromolecule	UDP-N-acetylglucosamine 2-epimerase (protein)

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1O6D \| pdb_00001o6d	Download File View File

Crystal structure of a hypothetical protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Thermotoga maritima
Macromolecule	Hypothetical UPF0247 protein TM0844 (protein)

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1VGT \| pdb_00001vgt	Download File View File

Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (protein)

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1VGU \| pdb_00001vgu	Download File View File

Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (protein)

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1VGV \| pdb_00001vgv	Download File View File

Crystal structure of UDP-N-acetylglucosamine_2 epimerase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Escherichia coli
Macromolecule	UDP-N-acetylglucosamine 2-epimerase (protein)
Unique Ligands	UD1

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1VGW \| pdb_00001vgw	Download File View File

Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Neisseria gonorrhoeae
Macromolecule	4-diphosphocytidyl-2C-methyl-D-erythritol synthase (protein)

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1VGX \| pdb_00001vgx	Download File View File

Crystal structure of a autoinducer-2 synthesis protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Deinococcus radiodurans
Macromolecule	S-ribosylhomocysteinase (protein)
Unique Ligands	ZN

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1VGY \| pdb_00001vgy	Download File View File

Crystal structure of succinyl diaminopimelate desuccinylase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Neisseria meningitidis MC58
Macromolecule	succinyl-diaminopimelate desuccinylase (protein)

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1VGZ \| pdb_00001vgz	Download File View File

Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Neisseria gonorrhoeae
Macromolecule	4-diphosphocytidyl-2C-methyl-D-erythritol synthase (protein)
Unique Ligands	SO4

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1VH0 \| pdb_00001vh0	Download File View File

Crystal structure of a hypothetical protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Staphylococcus aureus
Macromolecule	Hypothetical UPF0247 protein SAV0024/SA0023 (protein)

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1VH1 \| pdb_00001vh1	Download File View File

Crystal structure of CMP-KDO synthetase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-12-30
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	3-deoxy-manno-octulosonate cytidylyltransferase (protein)

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1VH2 \| pdb_00001vh2	Download File View File

Crystal structure of a autoinducer-2 synthesis protein

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-12-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Deinococcus radiodurans
Macromolecule	S-ribosylhomocysteinase (protein)
Unique Ligands	ZN

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1VH3 \| pdb_00001vh3	Download File View File

Crystal structure of CMP-KDO synthetase

Structural GenomiX

(2005) Proteins 60: 787-796

Released	2003-12-30
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Haemophilus influenzae
Macromolecule	3-deoxy-manno-octulosonate cytidylyltransferase (protein)
Unique Ligands	CMK