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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Suck, D."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Prochlorococcus marinus str. MIT 9313 (8)
	Clostridium tetanomorphum (3)

Taxonomy

Bacteria (11)

Experimental Method

	X-RAY DIFFRACTION (14)
	SOLUTION NMR (3)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (9)
	2.0 - 2.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (2)
	2010 - 2014 (13)
	2015 - 2019 (1)

Enzyme Classification Name

	Lyases (8)
	Isomerases (3)

Symmetry Type

	Asymmetric (13)
	Cyclic (6)
	Dihedral (6)

SCOP Classification

	All alpha proteins (7)
	Alpha and beta proteins (a/b) (3)

AllSelected

1 to 17 of 17 Structures

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1BE1 \| pdb_00001be1	Download File View File

GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE

Tollinger, M., Konrat, R., Hilbert, B.H., Marsh, E.N.G., Kraeutler, B.

(1998) Structure 6: 1021-1033

Released	1998-08-26
Method	SOLUTION NMR
Organisms	Clostridium tetanomorphum
Macromolecule	GLUTAMATE MUTASE (protein)

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1FMF \| pdb_00001fmf	Download File View File

REFINED SOLUTION STRUCTURE OF THE (13C,15N-LABELED) B12-BINDING SUBUNIT OF GLUTAMATE MUTASE FROM CLOSTRIDIUM TETANOMORPHUM

Hoffmann, B., Konrat, R., Tollinger, M., Huhta, M., Marsh, E.N.G., Kraeutler, B.

(2001) Chembiochem 2: 643-655

Released	2002-02-15
Method	SOLUTION NMR
Organisms	Clostridium tetanomorphum
Macromolecule	METHYLASPARTATE MUTASE S CHAIN (protein)

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1ID8 \| pdb_00001id8	Download File View File

NMR STRUCTURE OF GLUTAMATE MUTASE (B12-BINDING SUBUNIT) COMPLEXED WITH THE VITAMIN B12 NUCLEOTIDE

Tollinger, M., Eichmuller, C., Konrat, R., Huhta, M.S., Marsh, E.N.G., Krautler, B.

(2001) J Mol Biology 309: 777-791

Released	2001-06-27
Method	SOLUTION NMR
Organisms	Clostridium tetanomorphum
Macromolecule	METHYLASPARTATE MUTASE S CHAIN (protein)
Unique Ligands	DBI, FOP

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3TWE \| pdb_00003twe	Download File View File

Crystal Structure of the de novo designed peptide alpha4H

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Proc Natl Acad Sci U S A 109: 4810-4815

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.36 Å
Macromolecule	alpha4H (protein)
Unique Ligands	ACE, PGE

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3TWF \| pdb_00003twf	Download File View File

Crystal structure of the de novo designed fluorinated peptide alpha4F3a

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Proc Natl Acad Sci U S A 109: 4810-4815

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.54 Å
Macromolecule	alpha4F3a (protein)
Unique Ligands	ACE, NA, PGE

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3TWG \| pdb_00003twg	Download File View File

Crystal structure of the de novo designed fluorinated peptide alpha4F3af3d

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Proc Natl Acad Sci U S A 109: 4810-4815

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.72 Å
Macromolecule	alpha4F3af3d (protein)

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4G3B \| pdb_00004g3b	Download File View File

Crystal structure of the de novo designed fluorinated peptide alpha4F3d

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Protein Sci 21: 1705-1715

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.19 Å
Macromolecule	alpha4F3d (protein)
Unique Ligands	ACE

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4G4L \| pdb_00004g4l	Download File View File

Crystal structure of the de novo designed peptide alpha4tbA6

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Protein Sci 21: 1705-1715

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.54 Å
Macromolecule	alpha4tbA6 (protein)
Unique Ligands	ACE, P6G, PEG

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4G4M \| pdb_00004g4m	Download File View File

Crystal structure of the de novo designed fluorinated peptide alpha4F3(6-13)

Buer, B.C., Meagher, J.L., Stuckey, J.A., Marsh, E.N.G.

(2012) Protein Sci 21: 1705-1715

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.48 Å
Macromolecule	alpha4F3(6-13) (protein)
Unique Ligands	EDO, PG4

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4KVQ \| pdb_00004kvq	Download File View File

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase wild type with palmitic acid bound

Levy, C.W., Khara, B., Menon, N., Mansell, D., Das, D., Marsh, E.N.G., Leys, D., Scrutton, N.S.

(2013) Chembiochem 14: 1204-1208

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.842 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	FE, PLM

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4KVR \| pdb_00004kvr	Download File View File

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant V41Y)

Levy, C.W., Khara, B., Menon, N., Mansell, D., Das, D., Marsh, E.N.G., Leys, D., Scrutton, N.S.

(2013) Chembiochem 14: 1204-1208

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	6NA, FE

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4KVS \| pdb_00004kvs	Download File View File

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant A134F)

Levy, C.W., Khara, B., Menon, N., Mansell, D., Das, D., Marsh, E.N.G., Leys, D., Scrutton, N.S.

(2013) Chembiochem 14: 1204-1208

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	6NA, FE

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4PG0 \| pdb_00004pg0	Download File View File

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

Buer, B.C., Paul, B., Das, D., Stuckey, J.A., Marsh, E.N.G.

(2014) ACS Chem Biol 9: 2584-2593

Released	2014-11-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	DMS, FE, Y39

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4PG1 \| pdb_00004pg1	Download File View File

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

Buer, B.C., Paul, B., Das, D., Stuckey, J.A., Marsh, E.N.G.

(2014) ACS Chem Biol 9: 2584-2593

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	DMS, FE, Y39

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4PGI \| pdb_00004pgi	Download File View File

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Analogs Bound

Buer, B.C., Paul, B., Das, D., Stuckey, J.A., Marsh, E.N.G.

(2014) ACS Chem Biol 9: 2584-2593

Released	2015-02-11
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	EDO, FE, Y69

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4PGK \| pdb_00004pgk	Download File View File

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

Buer, B.C., Paul, B., Das, D., Stuckey, J.A., Marsh, E.N.G.

(2014) ACS Chem Biol 9: 2584-2593

Released	2014-12-24
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	FE, Y69

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4TW3 \| pdb_00004tw3	Download File View File

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

Buer, B.C., Paul, B., Das, D., Stuckey, J.A., Marsh, E.N.G.

(2014) ACS Chem Biol 9: 2584-2593

Released	2014-10-15
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Prochlorococcus marinus str. MIT 9313
Macromolecule	Aldehyde decarbonylase (protein)
Unique Ligands	EDO, FE, STE

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1BE1 | pdb_00001be1

GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE

1FMF | pdb_00001fmf

REFINED SOLUTION STRUCTURE OF THE (13C,15N-LABELED) B12-BINDING SUBUNIT OF GLUTAMATE MUTASE FROM CLOSTRIDIUM TETANOMORPHUM

1ID8 | pdb_00001id8

NMR STRUCTURE OF GLUTAMATE MUTASE (B12-BINDING SUBUNIT) COMPLEXED WITH THE VITAMIN B12 NUCLEOTIDE

3TWE | pdb_00003twe

Crystal Structure of the de novo designed peptide alpha4H

3TWF | pdb_00003twf

Crystal structure of the de novo designed fluorinated peptide alpha4F3a

3TWG | pdb_00003twg

Crystal structure of the de novo designed fluorinated peptide alpha4F3af3d

4G3B | pdb_00004g3b

Crystal structure of the de novo designed fluorinated peptide alpha4F3d

4G4L | pdb_00004g4l

Crystal structure of the de novo designed peptide alpha4tbA6

4G4M | pdb_00004g4m

Crystal structure of the de novo designed fluorinated peptide alpha4F3(6-13)

4KVQ | pdb_00004kvq

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase wild type with palmitic acid bound

4KVR | pdb_00004kvr

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant V41Y)

4KVS | pdb_00004kvs

Crystal Structure of Prochlorococcus marinus aldehyde-deformylating oxygenase (mutant A134F)

4PG0 | pdb_00004pg0

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

4PG1 | pdb_00004pg1

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

4PGI | pdb_00004pgi

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Analogs Bound

4PGK | pdb_00004pgk

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

4TW3 | pdb_00004tw3

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BE1 | pdb_00001be1

1FMF | pdb_00001fmf

1ID8 | pdb_00001id8

3TWE | pdb_00003twe

3TWF | pdb_00003twf

3TWG | pdb_00003twg

4G3B | pdb_00004g3b

4G4L | pdb_00004g4l

4G4M | pdb_00004g4m

4KVQ | pdb_00004kvq

4KVR | pdb_00004kvr

4KVS | pdb_00004kvs

4PG0 | pdb_00004pg0

4PG1 | pdb_00004pg1

4PGI | pdb_00004pgi

4PGK | pdb_00004pgk

4TW3 | pdb_00004tw3