RCSB PDB: Search

1EYY \| pdb_00001eyy	Download File View File

CRYSTAL STRUCTURE OF THE NADP+ DEPENDENT ALDEHYDE DEHYDROGENASE FROM VIBRIO HARVEYI.

Ahvazi, B., Coulombe, R., Delarge, M., Vedadi, M., Zhang, L., Meighen, E., Vrielink, A.

(2000) Biochem J 349: 853-861

Released	2000-05-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Vibrio harveyi
Macromolecule	ALDEHYDE DEHYDROGENASE (protein)
Unique Ligands	NAP

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1EZ0 \| pdb_00001ez0	Download File View File

CRYSTAL STRUCTURE OF THE NADP+ DEPENDENT ALDEHYDE DEHYDROGENASE FROM VIBRIO HARVEYI.

Ahvazi, B., Coulombe, R., Delarge, M., Vedadi, M., Zhang, L., Meighen, E., Vrielink, A.

(2000) Biochem J 349: 853-861

Released	2000-05-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Vibrio harveyi
Macromolecule	ALDEHYDE DEHYDROGENASE (protein)
Unique Ligands	NAP

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1T2A \| pdb_00001t2a	Download File View File

Crystal structure of human GDP-D-mannose 4,6-dehydratase

Walker, J.R., Vedadi, M., Sharma, S., Houston, S., Wasney, G., Loppnau, P., Sundstrom, M., Arrowsmith, C., Edwards, A., Oppermann, U.

To be published

Released	2004-05-10
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Homo sapiens
Macromolecule	GDP-mannose 4,6 dehydratase (protein)
Unique Ligands	GDP, NDP

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1TXJ \| pdb_00001txj	Download File View File

Crystal structure of translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi

Walker, J.R., Vedadi, M., Sharma, S., Houston, S., Lew, J., Amani, M., Wasney, G., Skarina, T., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-07-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium knowlesi
Macromolecule	translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi, PKN_PFE0545c (protein)

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1U1Z \| pdb_00001u1z	Download File View File

The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)

Kimber, M.S., Martin, F., Lu, Y., Houston, S., Vedadi, M., Dharamsi, A., Fiebig, K.M., Schmid, M., Rock, C.O.

(2004) J Biological Chem 279: 52593-52602

Released	2004-09-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (protein)
Unique Ligands	SO4

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1XCC \| pdb_00001xcc	Download File View File

1-Cys peroxidoxin from Plasmodium Yoelli

Vedadi, M., Sharma, S., Houston, S., Lew, J., Wasney, G., Amani, M., Xu, X., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Bochkarev, A., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Plasmodium yoelii
Macromolecule	1-Cys peroxiredoxin (protein)

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1XG5 \| pdb_00001xg5	Download File View File

Structure of human putative dehydrogenase MGC4172 in complex with NADP

Kavanagh, K., Ng, S., Sharma, S., Vedadi, M., von Delft, F., Walker, J.R., dhe Paganon, S., Bray, J., Oppermann, U., Edwards, A., Arrowsmith, C., Sundstrom, M., Structural Genomics Consortium (SGC)

To be published

Released	2004-10-05
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	ARPG836 (protein)
Unique Ligands	ACY, NAP

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1XSV \| pdb_00001xsv	Download File View File

X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50

Walker, J.R., Xu, X., Virag, C., McDonald, M.-L., Houston, S., Buzadzija, K., Vedadi, M., Dharamsi, A., Fiebig, K.M., Savchenko, A.

To be published

Released	2004-10-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	Hypothetical UPF0122 protein SAV1236 (protein)

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1Y6Z \| pdb_00001y6z	Download File View File

Middle domain of Plasmodium falciparum putative heat shock protein PF14_0417

Lunin, V.V., Botchkareva, E., Loppnau, P., Amani, M., Bray, J., Vedadi, M., Edwards, A., Arrowsmith, C., Sundstrom, M., Bochkarev, A., Hui, R., Plotnikova, O., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-02-08
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	heat shock protein, putative (protein)

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1Z7D \| pdb_00001z7d	Download File View File

Ornithine aminotransferase PY00104 from Plasmodium Yoelii

Walker, J.R., Alam, Z., Amani, M., Lew, J., Wasney, G., Boulanger, K., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Hui, R., Vedadi, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-07-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Plasmodium yoelii yoelii
Macromolecule	ornithine aminotransferase (protein)

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1Z81 \| pdb_00001z81	Download File View File

Crystal Structure of cyclophilin from Plasmodium yoelii.

Mulichak, A., Alam, Z., Amani, M., Lew, J., Wasney, G., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Hui, R., Vedadi, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-04-05
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Plasmodium yoelii yoelii
Macromolecule	cyclophilin (protein)

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2A4A \| pdb_00002a4a	Download File View File

Deoxyribose-phosphate aldolase from P. yoelii

Walker, J.R., Amani, M., Lew, J., Wiegelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Hui, R., Vedadi, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-09-06
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Plasmodium yoelii yoelii
Macromolecule	deoxyribose-phosphate aldolase (protein)

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2AMX \| pdb_00002amx	Download File View File

Crystal structure of Plasmodium Yoelii Adenosine deaminase (PY02076)

Dong, A., Vedadi, M., Wasney, G., Zhao, Y., Lew, J., Alam, Z., Melone, M., Koeieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Plasmodium yoelii
Macromolecule	adenosine deaminase (protein)
Unique Ligands	CO, UNX

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2AQW \| pdb_00002aqw	Download File View File

Structure of putative orotidine-monophosphate-decarboxylase from Plasmodium yoelii (PY01515)

Dong, A., Vedadi, M., Wasney, G., Zhao, Y., Lew, J., Alam, Z., Melone, M., Koeieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-08-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium yoelii
Macromolecule	putative orotidine-monophosphate-decarboxylase (protein)
Unique Ligands	IOD, SO4

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2AV4 \| pdb_00002av4	Download File View File

Crystal structure of Plasmodium yoelii thioredoxin-like protein 4A (DIM1)

Dong, A., Zhao, Y., Lew, J., Alam, Z., Melone, M., Wasney, G., Vedadi, M., Koeieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Artz, J., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-09-20
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Plasmodium yoelii
Macromolecule	Thioredoxin-like protein 4A (DIM1) (protein)
Unique Ligands	CL

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2AWP \| pdb_00002awp	Download File View File

Crystal structure of Plasmodium knowlesi structure of Iron Super-Oxide Dismutase

Dong, A., Zhao, Y., Lew, J., Alam, Z., Melone, M., Wasney, G., Vedadi, M., Koeieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-09-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium knowlesi
Macromolecule	Iron Super-Oxide Dismutase (protein)
Unique Ligands	CL, UNX

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2AYV \| pdb_00002ayv	Download File View File

Crystal structure of a putative ubiquitin-conjugating enzyme E2 from Toxoplasma gondii

Tempel, W., Dong, A., Zhao, Y., Lew, J., Alam, Z., Melone, M., Wasney, G., Kozieradzki, I., Vedadi, M., Arrowsmith, C., Sundstrom, M., Weigelt, J., Edwards, A., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.001 Å
Organisms	Toxoplasma gondii
Macromolecule	ubiquitin-conjugating enzyme E2 (protein)
Unique Ligands	UNX

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2B0R \| pdb_00002b0r	Download File View File

Crystal Structure of Cyclase-Associated Protein from Cryptosporidium parvum

Tempel, W., Dong, A., Zhao, Y., Lew, J., Kozieradzki, I., Alam, Z., Melone, M., Wasney, G., Vedadi, M., Arrowsmith, C., Edwards, A., Weigelt, J., Sundstrom, M., Hui, R., Bochkarev, A., Artz, J., Structural Genomics Consortium (SGC)

(2010) J Biological Chem 151: 100-110

Released	2005-09-27
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Cryptosporidium parvum
Macromolecule	possible adenyl cyclase-associated protein (protein)
Unique Ligands	UNX

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2B71 \| pdb_00002b71	Download File View File

Plasmodium yoelii cyclophilin-like protein

Dong, A., Finerty, P., Wasney, G., Vedadi, M., Lew, J., Zhao, Y., Kozieradzki, I., Melone, M., Alam, Z., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Hills, T., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-10-11
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Plasmodium yoelii
Macromolecule	cyclophilin-like protein (protein)
Unique Ligands	CL

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2BDD \| pdb_00002bdd	Download File View File

Crystal Structure of Holo-ACP-synthase from Plasmodium yoelii

Dong, A., Melone, M., Zhao, Y., Lew, J., Koeieradzki, I., Alam, Z., Wasney, G., Vedadi, M., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-11-01
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Plasmodium yoelii yoelii
Macromolecule	ACP-synthase (protein)

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2F4Z \| pdb_00002f4z	Download File View File

Toxoplasma gondii ubiquitin conjugating enzyme TgTwinScan_2721- E2 domain

Dong, A., Lew, J., Zhao, Y., Melone, M., Alam, Z., Kozieradski, I., Wasney, G., Vedadi, M., Sundstrom, M., Weigelt, J., Edwards, A.M., Arrowsmith, C.H., Bochkarev, A., Hui, R., Hills, T., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-12-27
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Toxoplasma gondii
Macromolecule	TgTwinScan_2721 - E2 domain (protein)
Unique Ligands	GOL, UNX

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2F6I \| pdb_00002f6i	Download File View File

Crystal structure of the ClpP protease catalytic domain from Plasmodium falciparum

Mulichak, A., Loppnau, P., Bray, J., Amani, M., Vedadi, M., Wasney, G., Finerty, P., Sundstrom, M., Weigelt, J., Edwards, A., Arrowsmith, C., Hui, R., Plotnikova, O., Structural Genomics Consortium (SGC)

(2010) J Mol Biology 404: 456-477

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Plasmodium falciparum
Macromolecule	ATP-dependent CLP protease, putative (protein)

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2FDS \| pdb_00002fds	Download File View File

Crystal Structure of Plasmodium Berghei Orotidine 5'-monophosphate Decarboxylase (ortholog of Plasmodium falciparum PF10_0225)

Qiu, W., Dong, A., Wasney, G., Vedadi, M., Lew, J., Kozieradski, I., Alam, Z., Melone, M., Weigelt, J., Sundstrom, M., Edwards, A., Arrowsmith, C., Hui, R., Gao, M., Bochkarev, A., Artz, J.D., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-12-20
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Plasmodium berghei
Macromolecule	orotidine-monophosphate-decarboxylase (protein)
Unique Ligands	IOD

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2FFC \| pdb_00002ffc	Download File View File

Crystal Structure of Plasmodium Vivax Orotidine-Monophosphate-Decarboxyl UMP Bound

Dong, A., Wasney, G., Vedadi, M., Lew, J., Koeieradzki, I., Zhao, Y., Edwards, A.M., Melone, M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2006-01-17
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Plasmodium vivax
Macromolecule	orotidine 5-monophosphate decarboxylase (protein)
Unique Ligands	U5P

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2FO3 \| pdb_00002fo3	Download File View File

Plasmodium vivax ubiquitin conjugating enzyme E2

Dong, A., Zhao, Y., Lew, J., Kozieradski, I., Alam, Z., Melone, M., Wasney, G., Vedadi, M., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Hui, R., Bochkarev, A., Qiu, W., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2006-01-31
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Plasmodium vivax
Macromolecule	Ubiquitin-conjugating enzyme (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1EYY | pdb_00001eyy

1EZ0 | pdb_00001ez0

1T2A | pdb_00001t2a

1TXJ | pdb_00001txj

1U1Z | pdb_00001u1z

1XCC | pdb_00001xcc

1XG5 | pdb_00001xg5

1XSV | pdb_00001xsv

1Y6Z | pdb_00001y6z

1Z7D | pdb_00001z7d

1Z81 | pdb_00001z81

2A4A | pdb_00002a4a

2AMX | pdb_00002amx

2AQW | pdb_00002aqw

2AV4 | pdb_00002av4

2AWP | pdb_00002awp

2AYV | pdb_00002ayv

2B0R | pdb_00002b0r

2B71 | pdb_00002b71

2BDD | pdb_00002bdd

2F4Z | pdb_00002f4z

2F6I | pdb_00002f6i

2FDS | pdb_00002fds

2FFC | pdb_00002ffc

2FO3 | pdb_00002fo3