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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Deppe, H."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Bos taurus (12)
	Homo sapiens (4)
	Naja sagittifera (4)
	Capra hircus (3)
	Daboia russelii pulchella (3)
	Bubalus bubalis (1)
	Camelus dromedarius (1)
	Momordica balsamina (1)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (1)

Taxonomy

	Eukaryota (25)
	Eukaryota (eukaryotes) (3)

Experimental Method

X-RAY DIFFRACTION (25)

Polymer Entity Type

Protein (25)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (2)
	2.0 - 2.5 (10)
	2.5 - 3.0 (7)
	3.0 - 3.5 (4)

Release Date

	2005 - 2009 (18)
	2010 - 2014 (7)

Enzyme Classification Name

	Hydrolases (20)
	Oxidoreductases (4)

Membrane Protein Annotation

OPM (1)

Symmetry Type

Asymmetric (25)

SCOP Classification

	Alpha and beta proteins (a/b) (12)
	All alpha proteins (7)
	Alpha and beta proteins (a+b) (2)

AllSelected

1 to 25 of 25 Structures

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Explore in 3D

2PX1 \| pdb_00002px1	Download File View File

crystal structure of the complex of bovine lactoferrin C-lobe with Ribose at 2.5 A resolution

Mir, R., Vikram, G., Sinha, M., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2007-05-29
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, RIP, SO4, ZN
Unique branched monosaccharides	BMA, NAG, NDG

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2QU9 \| pdb_00002qu9	Download File View File

Crystal structure of the complex of group II phospholipase A2 with Eugenol

Kumar, S., Vikram, G., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.

To be published

Released	2007-08-14
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Daboia russelii pulchella
Macromolecule	Phospholipase A2 VRV-PL-VIIIa (protein)
Unique Ligands	EUG, SO4

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2R9J \| pdb_00002r9j	Download File View File

Ligand recognition in C-lobe: The crystal structure of the complex of lactoferrin C-lobe with nicotinamide at 2.5 A resolution

Mir, R., Vikram, G., Singh, N., Kumar, S., Sinha, M., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2007-10-09
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin' (protein)
Unique Ligands	CO3, FE, NAG, NCA, SO4, ZN
Unique branched monosaccharides	NAG

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3CBI \| pdb_00003cbi	Download File View File

Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic acid at 3.1 A resolution

Kumar, S., Vikram, G., Singh, N., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2008-03-11
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Daboia russelii pulchella
Macromolecule	Phospholipase A2 VRV-PL-VIIIa (protein)
Unique Ligands	AJM, ANN

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3CFL \| pdb_00003cfl	Download File View File

Crystal structure of the complex formed between C-lobe of bovine lactoferrin and 5-chloro-6'-methyl-3-[4-(methylsulfonyl)phenyl]-2,3'-bipyridine at 2.25 A resolution

Mir, R., Vikram, G., Singh, N., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	5CH, CO3, FE, SO4, ZN
Unique branched monosaccharides	NAG

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3CI8 \| pdb_00003ci8	Download File View File

Crystal structure of the complex of C-lobe of lactoferrin with vitamin B3 (niacin) at 2.4 A resolution

Kushwaha, G.S., Vikram, G., Singh, N., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2008-03-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, NAG, NIO, SO4, ZN
Unique branched monosaccharides	NAG

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3COR \| pdb_00003cor	Download File View File

Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetylgalactosamine at 3.1 A resolution

Sharma, P., Vikram, G., Singh, N., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2008-04-08
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Camelus dromedarius
Macromolecule	Peptidoglycan recognition protein (protein)
Unique Ligands	NGA, TLA

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3CRB \| pdb_00003crb	Download File View File

Crystal structure of the complex of C-lobe of lactoferrin with 2-chromenone at 2.6 A resolution

Vikram, G., Mir, R., Sinha, M., Singh, N., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2008-04-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, COU, FE, SO4, ZN
Unique branched monosaccharides	NAG

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3E9X \| pdb_00003e9x	Download File View File

Crystal Structure of the Complex of C-lobe of Lactoferrin with Nimesulide at 2.7 A Resolution

Mir, R., Balaji, K., Vikram, G., Sinha, M., Singh, N., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin' (protein)
Unique Ligands	CO3, FE, NIM, SO4, ZN
Unique branched monosaccharides	MAN, NAG

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3FG5 \| pdb_00003fg5	Download File View File

Crystal structure determination of a ternary complex of phospholipase A2 with a pentapeptide FLSYK and Ajmaline at 2.5 A resolution

Kumar, M., Kumar, S., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.

To be published

Released	2008-12-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Daboia russelii pulchella
Macromolecule	Group II Phospholipase A2 (protein) pentapeptide FLSYK (protein)
Unique Ligands	AJM

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3FNL \| pdb_00003fnl	Download File View File

Crystal Structure of the Complex of Buffalo Lactoperoxidase with Salicylhydroxamic Acid at 2.48 A Resolution

Sheikh, I.A., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Sharma, S., Kaur, P., Singh, T.P.

To be published

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Bubalus bubalis
Macromolecule	Lactoperoxidase (protein)
Unique Ligands	CA, HEM, IOD, SCN, SHA
Unique branched monosaccharides	MAN, NAG

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3GCI \| pdb_00003gci	Download File View File

Crystal Structure of the Complex Formed Between a New Isoform of Phospholipase A2 with C-terminal Amyloid Beta Heptapeptide at 2 A Resolution

Mirza, Z., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Sharma, S., Srinivasan, A., Kaur, P., Singh, T.P.

To be published

Released	2009-03-10
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens Naja sagittifera
Macromolecule	Heptapeptide from Amyloid beta A4 protein (protein) Phospholipase A2 isoform 3 (protein)
Unique Ligands	CA

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3IAZ \| pdb_00003iaz	Download File View File

Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of the C-lobe complex with aspirin

Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.

(2009) Biophys J 97: 3178-3186

Released	2009-08-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	AIN, CO3, EOH, FE, SO4, ZN
Unique branched monosaccharides	BMA, MAN, NAG, NDG

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3IB0 \| pdb_00003ib0	Download File View File

Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with diclofenac

Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.

(2009) Biophys J 97: 3178-3186

Released	2009-08-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, DIF, EOH, FE, SO4, ZN
Unique branched monosaccharides	MAN, NAG

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3IB1 \| pdb_00003ib1	Download File View File

Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with indomethacin

Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.

(2009) Biophys J 97: 3178-3186

Released	2009-08-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, IMN, NAG, SO4, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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3IB2 \| pdb_00003ib2	Download File View File

structure of the complex of C-terminal half (C-lobe) of bovine lactoferrin with alpha-methyl-4-(2-methylpropyl) benzene acetic acid

Mir, R., Vikram, G., Kumar, R.P., Sinha, M., Singh, N., Sharma, S., Kaur, P., Singh, T.P.

(2009) Biophys J 97: 3178-3186

Released	2009-07-28
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, IBP, SO4, ZN
Unique branched monosaccharides	MAN, NAG

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3JQ5 \| pdb_00003jq5	Download File View File

Phospholipase A2 Prevents the Aggregation of Amyloid Beta Peptides: Crystal Structure of the Complex of Phospholipase A2 with Octapeptide Fragment of Amyloid Beta Peptide, Asp-Ala-Glu-Phe-Arg-His-Asp-Ser at 2 A Resolution

Mirza, Z., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Sharma, S., Srinivasan, A., Kaur, P., Singh, T.P.

To be published

Released	2009-09-29
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Homo sapiens Naja sagittifera
Macromolecule	Amyloid Beta Peptide (protein) Phospholipase A2 isoform 3 (protein)
Unique Ligands	CA

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3JQL \| pdb_00003jql	Download File View File

Crystal Structure of the Complex Formed Between Phospholipase A2 and a Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution

Mirza, Z., Vikram, G., Singh, N., Sinha, M., Sharma, S., Srinivasan, A., Kaur, P., Singh, T.P.

To be published

Released	2009-09-29
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens Naja sagittifera
Macromolecule	Acidic phospholipase A2 3 (Fragment) (protein) Amyloid Beta Peptide (protein)
Unique Ligands	CA

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3JTI \| pdb_00003jti	Download File View File

Crystal structure of the complex formed between Phospholipase A2 with beta-amyloid fragment, Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met at 1.8 A resolution

Pandey, N., Mirza, Z., Vikram, G., Singh, N., Bhushan, A., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.

To be published

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Naja sagittifera
Macromolecule	Phospholipase A2 isoform 3 (protein) octapeptide from Amyloid beta A4 protein (protein)
Unique Ligands	CA

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3MJN \| pdb_00003mjn	Download File View File

Crystal Structure of the complex of C-lobe of lactoferrin with isopropylamino-3-(1-naphthyloxy)propan-2-ol at 2.38 A Resolution

Srivastava, K., Vikram, G., Kaushik, S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-06-30
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, RNP, SO4, ZN
Unique branched monosaccharides	BMA, NAG

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3N3X \| pdb_00003n3x	Download File View File

Crystal Structure of the complex formed between type I ribosome inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A resolution

Kushwaha, G.S., Vikram, G., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-06-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Momordica balsamina Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	Ribosome inactivating protein (protein) SDDDMG peptide (protein)
Unique Ligands	GUN
Unique branched monosaccharides	NAG

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3N8F \| pdb_00003n8f	Download File View File

Crystal structure of the complex of goat lactoperoxidase with thiocyanate at 3.2 A resolution

Vikram, G., Singh, A.K., Singh, R.P., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-07-14
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Capra hircus
Macromolecule	Lactoperoxidase (protein)
Unique Ligands	CA, HEM, NO3, SCN
Unique branched monosaccharides	BMA, NAG

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3NAK \| pdb_00003nak	Download File View File

Crystal structure of the complex of goat lactoperoxidase with hypothiocyanite at 3.3 A resolution

Vikram, G., Singh, R.P., Singh, A.K., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-07-28
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Capra hircus
Macromolecule	Lactoperoxidase (protein)
Unique Ligands	CA, FMT, HEM, OSM
Unique branched monosaccharides	BMA, MAN, NAG

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3NIU \| pdb_00003niu	Download File View File

Crystal structure of the complex of dimeric goat lactoperoxidase with diethylene glycol at 2.9 A resolution

Vikram, G., Singh, R.P., Singh, A.K., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-07-14
Method	X-RAY DIFFRACTION 2.94 Å
Organisms	Capra hircus
Macromolecule	Lactoperoxidase (protein)
Unique Ligands	CA, HEM, NAG, PEG, PO4
Unique branched monosaccharides	BMA, NAG

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3O97 \| pdb_00003o97	Download File View File

Crystal Structure of the complex of C-lobe of lactoferrin with indole acetic acid at 2.68 A Resolution

Shukla, P.K., Sinha, M., Bhushan, A., Vikram, G., Kaur, P., Sharma, S., Singh, T.P.

To be published

Released	2010-09-08
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Bos taurus
Macromolecule	Lactotransferrin (protein)
Unique Ligands	CO3, FE, IAC, NAG, SO4, ZN
Unique branched monosaccharides	NAG

1 to 25 of 25 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2PX1 | pdb_00002px1

2QU9 | pdb_00002qu9

2R9J | pdb_00002r9j

3CBI | pdb_00003cbi

3CFL | pdb_00003cfl

3CI8 | pdb_00003ci8

3COR | pdb_00003cor

3CRB | pdb_00003crb

3E9X | pdb_00003e9x

3FG5 | pdb_00003fg5

3FNL | pdb_00003fnl

3GCI | pdb_00003gci

3IAZ | pdb_00003iaz

3IB0 | pdb_00003ib0

3IB1 | pdb_00003ib1

3IB2 | pdb_00003ib2

3JQ5 | pdb_00003jq5

3JQL | pdb_00003jql

3JTI | pdb_00003jti

3MJN | pdb_00003mjn

3N3X | pdb_00003n3x

3N8F | pdb_00003n8f

3NAK | pdb_00003nak

3NIU | pdb_00003niu

3O97 | pdb_00003o97