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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Gnanakalai, S."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (3)
	synthetic construct (3)
	Octodon degus (2)

Taxonomy

	Eukaryota (5)
	other sequences (3)

Experimental Method

SOLUTION NMR (10)

Polymer Entity Type

DNA (10)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (3)
	2020 - 2024 (5)

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1 to 10 of 10 Structures

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2LED	Download File View File

Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene

Trajkovski, M., Plavec, J., Webba da Silva, M.

(2012) J Am Chem Soc 134: 4132-4141

Released	2012-03-14
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(TPAPGPGPGPCPGPGPGPAPGPGPGPAPGPGPGPAP*A)-3') (nucleic acid)

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2LEE	Download File View File

Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene

Trajkovski, M., Plavec, J., Webba da Silva, M.

(2012) J Am Chem Soc 134: 4132-4141

Released	2012-03-14
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(TPAPGPGPGPCPGPGPGPAPGPGPGPAPGPGPGPAP*A)-3') (nucleic acid)

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5NYS	Download File View File

M2 G-quadruplex dilute solution

Trajkovski, M., Plavec, J., Endoh, T., Tateishi-Karimata, H., Sugimoto, N.

(2018) Nucleic Acids Res 46: 4301-4315

Released	2018-04-11
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	DNA (5'-D(TPAPGPGPGPAPCPGPGPGPCPGPGPGPCPAPGPGPGPT)-3') (nucleic acid)

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5NYT	Download File View File

M2 G-quadruplex 20 wt% ethylene glycol

Trajkovski, M., Plavec, J., Endoh, T., Tateishi-Karimata, H., Sugimoto, N.

(2018) Nucleic Acids Res 46: 4301-4315

Released	2018-04-11
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	DNA (5'-D(TPAPGPGPGPAPCPGPGPGPCPGPGPGPCPAPGPGPGPT)-3') (nucleic acid)

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5NYU	Download File View File

M2 G-quadruplex 10 wt% PEG8000

Trajkovski, M., Plavec, J., Endoh, T., Tateishi-Karimata, H., Sugimoto, N.

(2018) Nucleic Acids Res 46: 4301-4315

Released	2018-04-11
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	DNA (5'-D(TPAPGPGPGPAPCPGPGPGPCPGPGPGPCPAPGPGPGPT)-3') (nucleic acid)

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7QA9	Download File View File

10bp DNA/DNA duplex

Li, Q., Trajkovski, M., Fan, C., Chen, J., Zhou, Y., Lu, K., Li, H., Su, X., Xi, Z., Plavec, J., Zhou, C.

(2022) Angew Chem Int Ed Engl 61: e202201848-e202201848

Released	2022-11-16
Method	SOLUTION NMR
Organisms	Octodon degus
Macromolecule	DNA (5'-D(CPCPAPTPTPAPTPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPAPTPAPAPTPGPG)-3') (nucleic acid)

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7W0V	Download File View File

C4'-SCF3-DT modifeid DNA-DNA duplex

Li, Q., Trajkovski, M., Fan, C., Chen, J., Zhou, Y., Lu, K., Li, H., Su, X., Xi, Z., Plavec, J., Zhou, C.

(2022) Angew Chem Int Ed Engl 61: e202201848-e202201848

Released	2022-11-16
Method	SOLUTION NMR
Organisms	Octodon degus
Macromolecule	DNA (5'-D(CPCPAPTP(DSW)PAPTPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPAPTPAPAPTPGPG)-3') (nucleic acid)

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7Z9L	Download File View File

Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex

Ghosh, A., Trajkovski, M., Teulade-Fichou, M.P., Gabelica, V., Plavec, J.

(2022) Angew Chem Int Ed Engl 61: e202207384-e202207384

Released	2022-08-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DNA (5'-D(TPAPGPGPGPTPTPAPGPGPGPTPTPAPGPGPGPTPTPAPGPGP*G)-3') (nucleic acid)
Unique Ligands	PQ3