RCSB PDB: Search

1ALQ \| pdb_00001alq	Download File View File

CIRCULARLY PERMUTED BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1

Pieper, U., Herzberg, O.

(1997) Biochemistry 36: 8767-8774

Released	1997-09-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus
Macromolecule	CP254 BETA-LACTAMASE (protein)
Unique Ligands	CO3, SO4

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1FI4 \| pdb_00001fi4	Download File View File

THE X-RAY CRYSTAL STRUCTURE OF MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE AT 2.3 ANGSTROM RESOLUTION.

Bonanno, J.B., Edo, C., Eswar, N., Pieper, U., Romanowski, M.J., Ilyin, V., Gerchman, S.E., Kycia, H., Studier, F.W., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2001) Proc Natl Acad Sci U S A 98: 12896-12901

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE (protein)

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1I9A \| pdb_00001i9a	Download File View File

STRUCTURAL STUDIES OF CHOLESTEROL BIOSYNTHESIS: MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE AND ISOPENTENYL DIPHOSPHATE ISOMERASE

Bonanno, J.B., Edo, C., Eswar, N., Pieper, U., Romanowski, M.J., Ilyin, V., Gerchman, S.E., Kycia, H., Studier, F.W., Sali, A., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2001) Proc Natl Acad Sci U S A 98: 12896-12901

Released	2001-03-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE (protein)
Unique Ligands	MN

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1JR7 \| pdb_00001jr7	Download File View File

CRYSTAL STRUCTURE OF GAB REVEALS OXIDOREDUCTASE FOLD

Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2002) Protein Sci 11: 723-738

Released	2001-08-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION (protein)
Unique Ligands	FE2

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1OME \| pdb_00001ome	Download File View File

CRYSTAL STRUCTURE OF THE OMEGA LOOP DELETION MUTANT (RESIDUES 163-178 DELETED) OF BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1

Banerjee, S., Pieper, U., Herzberg, O.

(1998) Biochemistry 37: 3286-3296

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Staphylococcus aureus
Macromolecule	BETA-LACTAMASE (protein)
Unique Ligands	CL

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1PCH \| pdb_00001pch	Download File View File

STRUCTURAL EVIDENCE FOR THE EVOLUTIONARY DIVERGENCE OF MYCOPLASMA FROM GRAM-POSITIVE BACTERIA: THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN

Pieper, U., Herzberg, O.

(1995) Structure 3: 781-790

Released	1995-10-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mycoplasma capricolum
Macromolecule	PHOSPHOCARRIER PROTEIN (protein)
Unique Ligands	SO4

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1VDR \| pdb_00001vdr	Download File View File

DIHYDROFOLATE REDUCTASE

Pieper, U., Herzberg, O.

(1998) Structure 6: 75-88

Released	1998-02-25
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Haloferax volcanii
Macromolecule	DIHYDROFOLATE REDUCTASE (protein)
Unique Ligands	PO4

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2GDQ \| pdb_00002gdq	Download File View File

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution

Malashkevich, V.N., Toro, R., Sauder, J.M., Schwinn, K.D., Emtage, S., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Burley, S.K., Sali, A., Babbitt, P., Pieper, U., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	yitF (protein)

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2GGE \| pdb_00002gge	Download File View File

Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A

Malashkevich, V.N., Sauder, J.M., Schwinn, K.D., Emtage, S., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Burley, S.K., Sali, A., Babbitt, P., Pieper, U., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Bacillus subtilis
Macromolecule	yitF (protein)
Unique Ligands	CL, MG

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2LOM \| pdb_00002lom	Download File View File

Backbone structure of human membrane protein HIGD1A

Blain, K., Klammt, C., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HIG1 domain family member 1A (protein)

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2LON \| pdb_00002lon	Download File View File

Backbone structure of human membrane protein HIGD1B

Klammt, C., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HIG1 domain family member 1B (protein)

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2LOO \| pdb_00002loo	Download File View File

Backbone structure of human membrane protein TMEM14A from NOE data

Eichmann, C., Klammt, C., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14A (protein)

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2LOP \| pdb_00002lop	Download File View File

Backbone structure of human membrane protein TMEM14A

Eichmann, C., Klammt, C., Maslennikov, I., Kwiatkowski, W., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14A (protein)

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2LOQ \| pdb_00002loq	Download File View File

Backbone structure of human membrane protein FAM14B (Interferon alpha-inducible protein 27-like protein 1)

Klammt, C., Chui, E.J., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Interferon alpha-inducible protein 27-like protein 1 (protein)

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2LOR \| pdb_00002lor	Download File View File

Backbone structure of human membrane protein TMEM141

Bayrhuber, M., Klammt, C., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 141 (protein)

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2LOS \| pdb_00002los	Download File View File

Backbone structure of human membrane protein TMEM14C

Klammt, C., Vajpai, N., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14C (protein)

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3JTY \| pdb_00003jty	Download File View File

Crystal structure of a BenF-like porin from Pseudomonas fluorescens Pf-5

Sampathkumar, P., Lu, F., Zhao, X., Wasserman, S., Iuzuka, M., Bain, K., Rutter, M., Gheyi, T., Atwell, S., Luz, J., Gilmore, J., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) Proteins 78: 3056-3062

Released	2009-10-20
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Pseudomonas protegens Pf-5
Macromolecule	BenF-like porin (protein)
Unique Ligands	LDA

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3KEP \| pdb_00003kep	Download File View File

Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae

Sampathkumar, P., Ozyurt, S.A., Do, J., Bain, K., Dickey, M., Gheyi, T., Sali, A., Kim, S.J., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Rout, M., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) Proteins 78: 1992-1998

Released	2009-12-22
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Nucleoporin NUP145 (protein)
Unique Ligands	EDO

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3KES \| pdb_00003kes	Download File View File

Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae in the Hexagonal, P61 space group

Sampathkumar, P., Ozyurt, S.A., Do, J., Bain, K., Dickey, M., Gheyi, T., Sali, A., Kim, S.J., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Rout, M., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) Proteins 78: 1992-1998

Released	2009-12-22
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Nucleoporin NUP145 (protein)
Unique Ligands	EDO

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3KFO \| pdb_00003kfo	Download File View File

Crystal structure of the C-terminal domain from the nuclear pore complex component NUP133 from Saccharomyces cerevisiae

Sampathkumar, P., Bonanno, J.B., Miller, S., Bain, K., Dickey, M., Gheyi, T., Almo, S.C., Rout, M., Sali, A., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2011) Proteins 79: 1672-1677

Released	2010-01-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Nucleoporin NUP133 (protein)
Unique Ligands	GOL

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3NF5 \| pdb_00003nf5	Download File View File

Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata

Sampathkumar, P., Manglicmot, D., Bain, K., Gilmore, J., Gheyi, T., Rout, M., Sali, A., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2012) Proteins 80: 2110-2116

Released	2010-08-04
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Nakaseomyces glabratus
Macromolecule	Nucleoporin NUP116 (protein)
Unique Ligands	GOL

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4IFQ \| pdb_00004ifq	Download File View File

Crystal structure of Saccharomyces cerevisiae NUP192, residues 2 to 960 [ScNup192(2-960)]

Sampathkumar, P., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXstals)

(2013) Structure 21: 560-571

Released	2013-02-20
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Nucleoporin NUP192 (protein)
Unique Ligands	IOD, SO4

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ALQ | pdb_00001alq

1FI4 | pdb_00001fi4

1I9A | pdb_00001i9a

1JR7 | pdb_00001jr7

1OME | pdb_00001ome

1PCH | pdb_00001pch

1VDR | pdb_00001vdr

2GDQ | pdb_00002gdq

2GGE | pdb_00002gge

2LOM | pdb_00002lom

2LON | pdb_00002lon

2LOO | pdb_00002loo

2LOP | pdb_00002lop

2LOQ | pdb_00002loq

2LOR | pdb_00002lor

2LOS | pdb_00002los

3JTY | pdb_00003jty

3KEP | pdb_00003kep

3KES | pdb_00003kes

3KFO | pdb_00003kfo

3NF5 | pdb_00003nf5

4IFQ | pdb_00004ifq