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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Solomonson, M."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Mycolicibacterium smegmatis MC2 155 (4)
	Staphylococcus aureus subsp. aureus 21178 (4)
	Acidithiobacillus ferrooxidans ATCC 23270 (3)
	Mycobacterium tuberculosis H37Rv (1)

Taxonomy

Bacteria (12)

Experimental Method

	X-RAY DIFFRACTION (11)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (7)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)
	> 4.5 (1)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (7)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (4)
	Oxidoreductases (3)

Symmetry Type

	Cyclic (6)
	Asymmetric (7)

AllSelected

1 to 12 of 12 Structures

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3J83 \| pdb_00003j83	Download File View File

Heptameric EspB Rosetta model guided by EM density

Solomonson, M., DiMaio, F., Strynadka, N.C.J.

(2015) Structure 23: 571-583

Released	2015-03-11
Method	ELECTRON MICROSCOPY 30 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ESX-1 secretion-associated protein EspB (protein)

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3KPK \| pdb_00003kpk	Download File View File

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans, C160A mutant

Cherney, M.M., Zhang, Y., Solomonson, M., Weiner, J.H., James, M.N.G.

(2010) J Mol Biology 398: 292-305

Released	2010-04-07
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Acidithiobacillus ferrooxidans ATCC 23270
Macromolecule	Sulfide-quinone reductase, putative (protein)
Unique Ligands	FAD, H2S, LMT, PGR

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3T2Z \| pdb_00003t2z	Download File View File

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans

Cherney, M.M., Zhang, Y., Solomonson, M., Weiner, J.H., James, M.N.

(2010) J Mol Biology 398: 292-305

Released	2011-08-17
Method	X-RAY DIFFRACTION 2.2994 Å
Organisms	Acidithiobacillus ferrooxidans ATCC 23270
Macromolecule	Sulfide-quinone reductase, putative (protein)
Unique Ligands	BU2, FAD, H2S, S3H, SO4

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3T31 \| pdb_00003t31	Download File View File

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with decylubiquinone

Cherney, M.M., Zhang, Y., Solomonson, M., Weiner, J.H., James, M.N.

(2010) J Mol Biology 398: 292-305

Released	2011-08-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acidithiobacillus ferrooxidans ATCC 23270
Macromolecule	Sulfide-quinone reductase (protein)
Unique Ligands	DCQ, FAD, H2S, LMT

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4J94 \| pdb_00004j94	Download File View File

Crystal structure of MycP1 from the ESX-1 type VII secretion system

Solomonson, M., Wasney, G.A., Watanabe, N., Gruninger, R.J., Prehna, G., Strynadka, N.C.J.

(2013) J Biological Chem 288: 17782-17790

Released	2013-05-01
Method	X-RAY DIFFRACTION 1.857 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Membrane-anchored mycosin mycp1 (protein)

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4KPG \| pdb_00004kpg	Download File View File

Crystal structure of MycP1 from the ESX-1 type VII secretion system

Solomonson, M., Wasney, G.A., Watanabe, N., Gruninger, R.J., Prehna, G., Strynadka, N.C.J.

(2013) J Biological Chem 288: 17782-17790

Released	2013-05-22
Method	X-RAY DIFFRACTION 2.148 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Membrane-anchored mycosin mycp1 (protein)

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4WJ1 \| pdb_00004wj1	Download File View File

Crystal structure of EspB from the ESX-1 type VII secretion system

Solomonson, M., Strynadka, N.C.J.

(2015) Structure 23: 571-583

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.415 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Antigen MTB48, Mycobacterial protein (protein)

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4WJ2 \| pdb_00004wj2	Download File View File

Mycobacterial protein

Solomonson, M., Strynadka, N.C.J.

(2015) Structure 23: 571-583

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Antigen MTB48 (protein)

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4X6L \| pdb_00004x6l	Download File View File

Crystal structure of S. aureus TarM in complex with UDP

Worrall, L.J., Sobhanifar, S., Gruninger, R.J., Strynadka, N.C.

(2015) Proc Natl Acad Sci U S A 112: E576-E585

Released	2015-02-25
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Staphylococcus aureus subsp. aureus 21178
Macromolecule	TarM (protein)
Unique Ligands	UDP

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4X7M \| pdb_00004x7m	Download File View File

Crystal structure of S. aureus TarM G117R mutant in complex with UDP and UDP-GlcNAc

Worrall, L.J., Sobhanifar, S., Strynadka, N.C.

(2015) Proc Natl Acad Sci U S A 112: E576-E585

Released	2015-03-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Staphylococcus aureus subsp. aureus 21178
Macromolecule	TarM (protein)
Unique Ligands	UD1, UDP

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4X7P \| pdb_00004x7p	Download File View File

Crystal structure of apo S. aureus TarM

Worrall, L.J., Sobhanifar, S., Gruninger, R.J., Strynadka, N.C.

(2015) Proc Natl Acad Sci U S A 112: E576-E585

Released	2015-02-18
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Staphylococcus aureus subsp. aureus 21178
Macromolecule	TarM (protein)
Unique Ligands	SO4

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4X7R \| pdb_00004x7r	Download File View File

Crystal structure of S. aureus TarM G117R mutant in complex with Fondaparinux, alpha-GlcNAc-glycerol and UDP

Worrall, L.J., Sobhanifar, S., Strynadka, N.C.

(2015) Proc Natl Acad Sci U S A 112: E576-E585

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Staphylococcus aureus subsp. aureus 21178
Macromolecule	TarM (protein)
Unique Ligands	3YW, UDP
Unique branched monosaccharides	BDP, IDS, SGN, SUS, ZDO

1 to 12 of 12 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3J83 | pdb_00003j83

Heptameric EspB Rosetta model guided by EM density

3KPK | pdb_00003kpk

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans, C160A mutant

3T2Z | pdb_00003t2z

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans

3T31 | pdb_00003t31

Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with decylubiquinone

4J94 | pdb_00004j94

Crystal structure of MycP1 from the ESX-1 type VII secretion system

4KPG | pdb_00004kpg

Crystal structure of MycP1 from the ESX-1 type VII secretion system

4WJ1 | pdb_00004wj1

Crystal structure of EspB from the ESX-1 type VII secretion system

4WJ2 | pdb_00004wj2

Mycobacterial protein

4X6L | pdb_00004x6l

Crystal structure of S. aureus TarM in complex with UDP

4X7M | pdb_00004x7m

Crystal structure of S. aureus TarM G117R mutant in complex with UDP and UDP-GlcNAc

4X7P | pdb_00004x7p

Crystal structure of apo S. aureus TarM

4X7R | pdb_00004x7r

Crystal structure of S. aureus TarM G117R mutant in complex with Fondaparinux, alpha-GlcNAc-glycerol and UDP

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

3J83 | pdb_00003j83

3KPK | pdb_00003kpk

3T2Z | pdb_00003t2z

3T31 | pdb_00003t31

4J94 | pdb_00004j94

4KPG | pdb_00004kpg

4WJ1 | pdb_00004wj1

4WJ2 | pdb_00004wj2

4X6L | pdb_00004x6l

4X7M | pdb_00004x7m

4X7P | pdb_00004x7p

4X7R | pdb_00004x7r