RCSB PDB: Search

1HQL \| pdb_00001hql	Download File View File

The xenograft antigen in complex with the B4 isolectin of Griffonia simplicifolia lectin-1

Tempel, W., Lipscomb, L.A., Rose, J.P., Woods, R.J.

(2002) J Biological Chem 277: 6615-6621

Released	2002-01-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Griffonia simplicifolia
Macromolecule	LECTIN (protein)
Unique Ligands	CA, MN
Unique branched monosaccharides	GLA, MBG, NAG

Explore in 3D

1L7L \| pdb_00001l7l	Download File View File

Crystal structure of Pseudomonas aeruginosa lectin 1 determined by single wavelength anomalous scattering phasing method

Liu, Z.J., Tempel, W., Lin, D., Karaveg, K., Doyle, R.J., Rose, J.P., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

(2002) Am Cryst Assoc ,abstr Papers (annual Meeting) 29: 98

Released	2002-12-11
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	PA-I galactophilic lectin (protein)
Unique Ligands	CA

Explore in 3D

1NNQ \| pdb_00001nnq	Download File View File

rubrerythrin from Pyrococcus furiosus Pfu-1210814

Liu, Z.-J., Tempel, W., Schubot, F.D., Shah, A., Arendall III, W.B., Rose, J.P., Richardson, D.C., Richardson, J.S., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2004) Proteins 57: 878-882

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Pyrococcus furiosus
Macromolecule	Rubrerythrin (protein)
Unique Ligands	ZN

Explore in 3D

1NXC \| pdb_00001nxc	Download File View File

Structure of mouse Golgi alpha-1,2-mannosidase IA reveals the molecular basis for substrate specificity among Class I enzymes (family 47 glycosidases)

Tempel, W., Liu, Z.-J., Karaveg, K., Rose, J., Moremen, K.W., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2004) J Biological Chem 279: 29774-29786

Released	2004-05-04
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Mus musculus
Macromolecule	Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (protein)
Unique Ligands	CA
Unique branched monosaccharides	BMA, MAN, NAG

Explore in 3D

1RYQ \| pdb_00001ryq	Download File View File

Putative DNA-directed RNA polymerase, subunit e'' from Pyrococcus Furiosus Pfu-263306-001

Liu, Z.-J., Chen, L., Tempel, W., Shah, A., Arendall III, W.B., Rose, J.P., Brereton, P.S., Izumi, M., Jenney Jr., F.E., Lee, H.S., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2005) Acta Crystallogr D Biol Crystallogr 61: 520-527

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Pyrococcus furiosus
Macromolecule	DNA-directed RNA polymerase, subunit e'' (protein)
Unique Ligands	ZN

Explore in 3D

1SEN \| pdb_00001sen	Download File View File

Endoplasmic reticulum protein Rp19 O95881

Liu, Z.-J., Chen, L., Tempel, W., Shah, A., Lee, D., Dailey, T.A., Mayer, M.R., Rose, J.P., Richardson, D.C., Richardson, J.S., Dailey, H.A., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-07-13
Method	X-RAY DIFFRACTION 1.199 Å
Organisms	Homo sapiens
Macromolecule	Thioredoxin-like protein p19 (protein)
Unique Ligands	CL, PT

Explore in 3D

1SGW \| pdb_00001sgw	Download File View File

Putative ABC transporter (ATP-binding protein) from Pyrococcus furiosus Pfu-867808-001

Liu, Z.J., Tempel, W., Shah, A., Chen, L., Lee, D., Kelley, L.-L.C., Dillard, B.D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	putative ABC transporter (protein)
Unique Ligands	CL, NA

Explore in 3D

1TWL \| pdb_00001twl	Download File View File

Inorganic pyrophosphatase from Pyrococcus furiosus Pfu-264096-001

Zhou, W., Tempel, W., Liu, Z.-J., Chen, L., Clancy Kelley, L.-L., Dillard, B.D., Hopkins, R.C., Arendall III, W.B., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, J.S., Richardson, D.C., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.201 Å
Organisms	Pyrococcus furiosus
Macromolecule	Inorganic pyrophosphatase (protein)

Explore in 3D

1TXJ \| pdb_00001txj	Download File View File

Crystal structure of translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi

Walker, J.R., Vedadi, M., Sharma, S., Houston, S., Lew, J., Amani, M., Wasney, G., Skarina, T., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-07-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium knowlesi
Macromolecule	translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi, PKN_PFE0545c (protein)

Explore in 3D

1UPS \| pdb_00001ups	Download File View File

GlcNAc[alpha]1-4Gal releasing endo-[beta]-galactosidase from Clostridium perfringens

Tempel, W., Liu, Z.-J., Horanyi, P.S., Deng, L., Lee, D., Newton, M.G., Rose, J.P., Ashida, H., Li, S.-C., Li, Y.-T., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2005) Proteins 59: 141-144

Released	2004-11-25
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Clostridium perfringens
Macromolecule	GLCNAC-ALPHA-1,4-GAL-RELEASING ENDO-BETA-GALACTOSIDASE (protein)
Unique Ligands	CA

Explore in 3D

1VJK \| pdb_00001vjk	Download File View File

Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001

Chen, L., Liu, Z.J., Tempel, W., Shah, A., Lee, D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Pyrococcus furiosus
Macromolecule	molybdopterin converting factor, subunit 1 (protein)

Explore in 3D

1VK1 \| pdb_00001vk1	Download File View File

Conserved hypothetical protein from Pyrococcus furiosus Pfu-392566-001

Shah, A., Liu, Z.J., Tempel, W., Chen, L., Lee, D., Yang, H., Chang, J., Zhao, M., Ng, J., Rose, J., Brereton, P.S., Izumi, M., Jenney Jr., F.E., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

(2007) BMC Struct Biol 7: 46-46

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Pyrococcus furiosus
Macromolecule	Conserved hypothetical protein (protein)
Unique Ligands	NA, PEG, PO4

Explore in 3D

1VKA \| pdb_00001vka	Download File View File

Southeast Collaboratory for Structural Genomics: Hypothetical Human Protein Q15691 N-Terminal Fragment

Liu, Z.-J., Tempel, W., Schubot, F.D., Shah, A., Dailey, T.A., Mayer, M.R., Rose, J.P., Dailey, H.A., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-07-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Microtubule-associated protein RP/EB family member 1 (protein)

Explore in 3D

1VKC \| pdb_00001vkc	Download File View File

Putative acetyl transferase from Pyrococcus furiosus

Habel, J.E., Liu, Z.-J., Tempel, W., Rose, J.P., Brereton, P.S., Izumi, M., Jenney Jr, F.E., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-12-14
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Pyrococcus furiosus
Macromolecule	putative acetyl transferase (protein)
Unique Ligands	IOD

Explore in 3D

1W9G \| pdb_00001w9g	Download File View File

Structure of ERH (Enhencer of Rudimentary Gene)

Wan, C., Tempel, W., Liu, Z., Wang, B.-C., Rose, R.B.

(2005) Biochemistry 44: 5017

Released	2005-04-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ENHANCER OF RUDIMENTARY HOMOLOG (protein)

Explore in 3D

1X9D \| pdb_00001x9d	Download File View File

Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue

Karaveg, K., Tempel, W., Liu, Z.J., Siriwardena, A., Moremen, K.W., Wang, B.C.

(2005) J Biological Chem 280: 16197-16207

Released	2005-02-22
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Homo sapiens
Macromolecule	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (protein)
Unique Ligands	BU1, CA, SO4
Unique branched monosaccharides	MAN, Z5L

Explore in 3D

1XCC \| pdb_00001xcc	Download File View File

1-Cys peroxidoxin from Plasmodium Yoelli

Vedadi, M., Sharma, S., Houston, S., Lew, J., Wasney, G., Amani, M., Xu, X., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Bochkarev, A., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Plasmodium yoelii
Macromolecule	1-Cys peroxiredoxin (protein)

Explore in 3D

1XE1 \| pdb_00001xe1	Download File View File

Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001

Chang, J.C., Zhao, M., Zhou, W., Liu, Z.J., Tempel, W., Arendall III, W.B., Chen, L., Lee, D., Habel, J.E., Rose, J.P., Richardson, J.S., Richardson, D.C., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-09-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus furiosus
Macromolecule	hypothetical protein PF0907 (protein)
Unique Ligands	SO4

Explore in 3D

1XG7 \| pdb_00001xg7	Download File View File

Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus

Chang, J., Zhao, M., Horanyi, P., Xu, H., Yang, H., Liu, Z.-J., Chen, L., Zhou, W., Habel, J., Tempel, W., Lee, D., Lin, D., Chang, S.-H., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.-S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Chen, C.-Y., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Rose, J.P., Adams, M.W.W., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-11-23
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	hypothetical protein (protein)

Explore in 3D

1XHC \| pdb_00001xhc	Download File View File

NADH oxidase /nitrite reductase from Pyrococcus furiosus Pfu-1140779-001

Horanyi, P., Tempel, W., Weinberg, M.V., Liu, Z.-J., Shah, A., Chen, L., Lee, D., Sugar, F.J., Brereton, P.S., Izumi, M., Poole II, F.L., Shah, C., Jenney Jr., F.E., Arendall III, W.B., Rose, J.P., Adams, M.W.W., Richardson, J.S., Richardson, D.C., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	NADH oxidase /nitrite reductase (protein)
Unique Ligands	FAD

Explore in 3D

1XHO \| pdb_00001xho	Download File View File

Chorismate mutase from Clostridium thermocellum Cth-682

Xu, H., Chen, L., Lee, D., Habel, J.E., Nguyen, J., Chang, S.-H., Kataeva, I., Chang, J., Zhao, M., Yang, H., Horanyi, P., Florence, Q., Tempel, W., Zhou, W., Lin, D., Zhang, H., Praissman, J., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Ljungdahl, L., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2005) Acta Crystallogr D Biol Crystallogr 61: 960-966

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Acetivibrio thermocellus
Macromolecule	Chorismate mutase (protein)
Unique Ligands	UNX

Explore in 3D

1XI3 \| pdb_00001xi3	Download File View File

Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001

Zhou, W., Chen, L., Tempel, W., Liu, Z.-J., Habel, J., Lee, D., Lin, D., Chang, S.-H., Dillard, B.D., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Kelley, L.-L.C., Lee, H.-S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Rose, J.P., Adams, M.W.W., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-09-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pyrococcus furiosus
Macromolecule	Thiamine phosphate pyrophosphorylase (protein)
Unique Ligands	NI, SO4, UNX

Explore in 3D

1XI9 \| pdb_00001xi9	Download File View File

Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001

Zhou, W., Tempel, W., Shah, A., Chen, L., Liu, Z.-J., Lee, D., Lin, D., Chang, S.-H., Brereton, P.S., Izumi, M., Jenney Jr., F.E., Lee, H.-S., Poole II, F.L., Shah, C., Sugar, F.J., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Rose, J.P., Adams, M.W.W., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	putative transaminase (protein)
Unique Ligands	PLP

Explore in 3D

1XK8 \| pdb_00001xk8	Download File View File

Divalent cation tolerant protein CUTA from Homo sapiens O60888

Tempel, W., Chen, L., Liu, Z.-J., Lee, D., Shah, A., Dailey, T.A., Mayer, M.R., Arendall III, W.B., Rose, J.P., Dailey, H.A., Richardson, J.S., Richardson, D.C., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-10-19
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Divalent cation tolerant protein CUTA (protein)
Unique Ligands	NA

Explore in 3D

1XMA \| pdb_00001xma	Download File View File

Structure of a transcriptional regulator from Clostridium thermocellum Cth-833

Yang, H., Chen, L., Lee, D., Habel, J., Nguyen, J., Chang, S.-H., Kataeva, I., Xu, H., Chang, J., Zhao, M., Horanyi, P., Florence, Q., Zhou, W., Tempel, W., Lin, D., Praissman, J., Zhang, H., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Ljungdahl, L., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-12-14
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Acetivibrio thermocellus
Macromolecule	Predicted transcriptional regulator (protein)
Unique Ligands	HG, UNX

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1HQL | pdb_00001hql

1L7L | pdb_00001l7l

1NNQ | pdb_00001nnq

1NXC | pdb_00001nxc

1RYQ | pdb_00001ryq

1SEN | pdb_00001sen

1SGW | pdb_00001sgw

1TWL | pdb_00001twl

1TXJ | pdb_00001txj

1UPS | pdb_00001ups

1VJK | pdb_00001vjk

1VK1 | pdb_00001vk1

1VKA | pdb_00001vka

1VKC | pdb_00001vkc

1W9G | pdb_00001w9g

1X9D | pdb_00001x9d

1XCC | pdb_00001xcc

1XE1 | pdb_00001xe1

1XG7 | pdb_00001xg7

1XHC | pdb_00001xhc

1XHO | pdb_00001xho

1XI3 | pdb_00001xi3

1XI9 | pdb_00001xi9

1XK8 | pdb_00001xk8

1XMA | pdb_00001xma