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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Tung, W.L."

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Search Summary

This query matches 60 Structures.

Refinements

Structure Determination Methodology

experimental (60)

Scientific Name of Source Organism

	Homo sapiens (30)
	Staphylococcus aureus (19)
	Streptococcus pneumoniae (4)
	Pseudomonas aeruginosa (3)
	Lachnospira eligens (1)
	Mediterraneibacter gnavus ATCC 29149 (1)
	Saccharomyces cerevisiae (1)
	Streptococcus pneumoniae R6 (1)

Taxonomy

	Eukaryota (31)
	Bacteria (29)

Experimental Method

	X-RAY DIFFRACTION (59)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (60)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (30)
	2.0 - 2.5 (19)
	2.5 - 3.0 (6)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (3)
	2015 - 2019 (22)
	2020 - 2024 (32)

Enzyme Classification Name

	Transferases (26)
	Oxidoreductases (3)
	Hydrolases (2)
	Translocases (1)

Symmetry Type

	Asymmetric (29)
	Cyclic (31)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (23)
	Artifacts (14)
	Alpha and beta proteins (a+b) (4)

AllSelected

1 to 25 of 60 Structures

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2W9G \| pdb_00002w9g	Download File View File

Wild-type Staphylococcus aureus DHFR in complex with NADPH and trimethoprim

Soutter, H.H., Miller, J.R.

(2009) Proteins 76: 706

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Staphylococcus aureus
Macromolecule	DIHYDROFOLATE REDUCTASE (protein)
Unique Ligands	NDP, TOP

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2W9H \| pdb_00002w9h	Download File View File

Wild-type Staphylococcus aureus DHFR in complex with trimethoprim

Soutter, H.H., Miller, J.R.

(2009) Proteins 76: 706

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Staphylococcus aureus
Macromolecule	DIHYDROFOLATE REDUCTASE (protein)
Unique Ligands	EDO, TOP

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2W9S \| pdb_00002w9s	Download File View File

Staphylococcus aureus S1:DHFR in complex with trimethoprim

Soutter, H.H., Miller, J.R.

(2009) Proteins 76: 706

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus
Macromolecule	DIHYDROFOLATE REDUCTASE TYPE 1 FROM TN4003 (protein)
Unique Ligands	GOL, NDP, TOP

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3LSJ \| pdb_00003lsj	Download File View File

Crystal structure of DesT in complex with palmitoyl-CoA

Miller, D.J., White, S.W.

(2010) Nat Struct Mol Biol 17: 971-975

Released	2010-08-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	DesT (protein)
Unique Ligands	COA, PLM

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3LSP \| pdb_00003lsp	Download File View File

Crystal Structure of DesT bound to desCB promoter and oleoyl-CoA

Miller, D.J., White, S.W.

(2010) Nat Struct Mol Biol 17: 971-975

Released	2010-08-04
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	DesT (protein) DNA (5'-D(TPCPAPAPTPCPGPAPGPTPCPAPAPCPAPAPGPCPGPTPTPCPAPCPTPGPAPTPGPTPA)-3') (nucleic acid) DNA (5'-D(TPTPAPCPAPTPCPAPGPTPGPAPAPCPGPCPTPTPGPTPTPGPAPCPTPCPGPAPTPTPG)-3') (nucleic acid)
Unique Ligands	OLA, SO4

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3LSR \| pdb_00003lsr	Download File View File

Crystal structure of DesT in complex with duplex DNA

Miller, D.J., White, S.W.

(2010) Nat Struct Mol Biol 17: 971-975

Released	2010-08-04
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	DesT (protein) DNA (27-MER) (nucleic acid)
Unique Ligands	SO4

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5KPR \| pdb_00005kpr	Download File View File

PANK3-AMPPNP-Pantothenate complex

White, S.W., Yun, M.

(2016) J Biological Chem 291: 22302-22314

Released	2016-08-31
Method	X-RAY DIFFRACTION 1.827 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	ANP, EDO, MG, PAU

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5KPT \| pdb_00005kpt	Download File View File

PANK3-AMPPNP complex

White, S.W., Yun, M.

(2016) J Biological Chem 291: 22302-22314

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	ANP, EDO, MG

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5KPZ \| pdb_00005kpz	Download File View File

PANK3-ADP-PhosphoPantothenate complex

White, S.W., Yun, M.

(2016) J Biological Chem 291: 22302-22314

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	ADP, MG, PAZ

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5KQ8 \| pdb_00005kq8	Download File View File

PANK3-AMPPN complex

White, S.W., Yun, M.

(2016) J Biological Chem 291: 22302-22314

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.002 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	AN2, EDO, MG

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5KQD \| pdb_00005kqd	Download File View File

PANK3:Palmitoyl-CoA complex

White, S.W., Yun, M.

(2016) J Biological Chem 291: 22302-22314

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	PKZ, SO4

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5UC4 \| pdb_00005uc4	Download File View File

Hsp90b N-terminal domain with inhibitors

Deng, J., Peng, S., Balch, M., Matts, R.

(2018) Nat Commun 9: 425-425

Released	2018-01-17
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-beta (protein)
Unique Ligands	83S, DMS, GOL

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5UCH \| pdb_00005uch	Download File View File

Hsp90b N-terminal domain with inhibitors

Peng, S., Balch, M., Matts, R., Deng, J.

(2018) Nat Commun 9: 425-425

Released	2018-01-10
Method	X-RAY DIFFRACTION 2.654 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-beta (protein)
Unique Ligands	871, DMS, GOL

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5UCI \| pdb_00005uci	Download File View File

Hsp90b N-terminal domain with inhibitors

Peng, S., Balch, M., Matts, R., Deng, J.

(2018) Nat Commun 9: 425-425

Released	2018-01-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-beta (protein)
Unique Ligands	874, DMS, GOL

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5UCJ \| pdb_00005ucj	Download File View File

Hsp90b N-terminal domain with inhibitors

Peng, S., Balch, M., Matts, R., Deng, J.

(2018) Nat Commun 9: 425-425

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.693 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-beta (protein)
Unique Ligands	DMS, KU3

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5UTO \| pdb_00005uto	Download File View File

The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstrom resolution

Cuypers, M.G., Ericson, M., Subramanian, C., Broussard, T.C., Miller, D.J., White, S.W., Rock, C.O.

(2018) J Biological Chem

Released	2018-02-21
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Staphylococcus aureus
Macromolecule	EDD domain protein, DegV family (protein)
Unique Ligands	PLM

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5UXY \| pdb_00005uxy	Download File View File

The crystal structure of a DegV family protein from Eubacterium eligens loaded with heptadecanoic acid to 1.80 Angstrom resolution (ALTERNATIVE REFINEMENT OF PDB 3FDJ with HEPTADECANOIC acid)

Cuypers, M.G., Ericson, M., subramanian, C., White, S.W., Rock, C.O.

(2018) J Biological Chem

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lachnospira eligens
Macromolecule	DegV family protein (protein)
Unique Ligands	ACY, NA, X90

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5V85 \| pdb_00005v85	Download File View File

The crystal structure of the protein of DegV family COG1307 from Ruminococcus gnavus ATCC 29149 (alternative refinement of PDB 3JR7 with Vaccenic acid)

Cuypers, M.G., Ericson, M., subramanian, C., White, S.W., Rock, C.O.

(2018) J Biological Chem

Released	2018-11-21
Method	X-RAY DIFFRACTION 2.003 Å
Organisms	Mediterraneibacter gnavus ATCC 29149
Macromolecule	EDD domain protein, DegV family (protein)
Unique Ligands	NA, PO4, VCA

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5WOO \| pdb_00005woo	Download File View File

The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with Myristic acid (C14:0) to 1.78 Angstrom resolution

Cuypers, M.G., Ericson, M., Subramanian, C., White, S.W., Rock, C.O.

(2019) J Biological Chem 294: 38-49

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Staphylococcus aureus
Macromolecule	EDD domain protein, DegV family (protein)
Unique Ligands	GOL, MYR

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6ALW \| pdb_00006alw	Download File View File

The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with 12-Methyl Myristic Acid (C15:0) to 1.63 Angstrom resolution

Cuypers, M.G., Ericson, M., Subramanian, C., White, S.W., Rock, C.O.

(2019) J Biological Chem 294: 38-49

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Staphylococcus aureus
Macromolecule	EDD domain protein, DegV family (protein)
Unique Ligands	BMJ, BNV, GOL

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6B3V \| pdb_00006b3v	Download File View File

PANK3 complex with compound PZ-2891

White, S.W., Yun, M.

(2018) Nat Commun 9: 4399-4399

Released	2018-08-29
Method	X-RAY DIFFRACTION 1.601 Å
Organisms	Homo sapiens
Macromolecule	Pantothenate kinase 3 (protein)
Unique Ligands	7DQ, ANP, EDO, MG

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6B9I \| pdb_00006b9i	Download File View File

The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with 14-Methylhexadecanoic Acid (Anteiso C17:0) to 1.93 Angstrom resolution

Cuypers, M.G., Ericson, M., Subramanian, C., White, S.W., Rock, C.O.

(2019) J Biological Chem 294: 38-49

Released	2018-10-10
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Staphylococcus aureus
Macromolecule	Fatty acid Kinase (Fak) B1 (protein)
Unique Ligands	D0G, GOL, NA

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6CNG \| pdb_00006cng	Download File View File

The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B3 protein loaded with linoleic acid to 1.47 Angstrom resolution

Cuypers, M.G., Subramanian, C., White, S.W., Rock, C.O.

To be published

Released	2019-07-03
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	Fatty Acid Kinase (Fak) B3 protein (protein)
Unique Ligands	ACT, EIC, GOL, NA

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6DJ6 \| pdb_00006dj6	Download File View File

The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with cis-oleic acid to 1.9 Angstrom resolution

Cuypers, M.G., Subramanian, C., White, S.W., Rock, C.O.

To be published

Released	2019-05-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pneumoniae
Macromolecule	Fatty Acid Kinase (Fak) B2 protein (SPR1019) (protein)
Unique Ligands	GOL, NA, OLA

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6DKE \| pdb_00006dke	Download File View File

The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with palmitic acid (C16:0) to 1.76 Angstrom resolution

Cuypers, M.G., Subramanian, C., White, S.W., Rock, C.O.

To be published

Released	2019-05-29
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Streptococcus pneumoniae
Macromolecule	Fatty Acid Kinase (Fak) B1 protein (protein)
Unique Ligands	PLM

1 to 25 of 60 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2W9G | pdb_00002w9g

2W9H | pdb_00002w9h

2W9S | pdb_00002w9s

3LSJ | pdb_00003lsj

3LSP | pdb_00003lsp

3LSR | pdb_00003lsr

5KPR | pdb_00005kpr

5KPT | pdb_00005kpt

5KPZ | pdb_00005kpz

5KQ8 | pdb_00005kq8

5KQD | pdb_00005kqd

5UC4 | pdb_00005uc4

5UCH | pdb_00005uch

5UCI | pdb_00005uci

5UCJ | pdb_00005ucj

5UTO | pdb_00005uto

5UXY | pdb_00005uxy

5V85 | pdb_00005v85

5WOO | pdb_00005woo

6ALW | pdb_00006alw

6B3V | pdb_00006b3v

6B9I | pdb_00006b9i

6CNG | pdb_00006cng

6DJ6 | pdb_00006dj6

6DKE | pdb_00006dke