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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = AZI

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Search Summary

This query matches 249 Structures.

Refinements

Structure Determination Methodology

experimental (249)

Scientific Name of Source Organism

	Homo sapiens (45)
	Bos taurus (18)
	Rattus norvegicus (11)
	Tequatrovirus T4 (11)
	Gallus gallus (9)
	Escherichia coli (8)
	Aspergillus flavus (7)
	Pseudomonas aeruginosa (6)
	synthetic construct (6)
	Bacillus cereus (5)

More...

Taxonomy

	Eukaryota (134)
	Bacteria (98)
	Duplodnaviria (12)
	other sequences (6)
	Archaea (4)
	unclassified sequences (2)
	Eukaryota (eukaryotes) (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (248)
	ELECTRON MICROSCOPY (1)
	EPR (1)

Polymer Entity Type

	Protein (249)
	DNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (31)
	1.5 - 2.0 (119)
	2.0 - 2.5 (72)
	2.5 - 3.0 (19)
	3.0 - 3.5 (4)
	3.5 - 4.0 (2)

Release Date

	1985 - 1989 (1)
	1990 - 1994 (7)
	1995 - 1999 (17)
	2000 - 2004 (22)
	2005 - 2009 (63)
	2010 - 2014 (65)
	2015 - 2019 (42)
	2020 - 2024 (31)
	2025 - 2029 (1)

Enzyme Classification Name

	Oxidoreductases (99)
	Hydrolases (67)
	Translocases (19)
	Lyases (24)
	Transferases (9)
	Ligases (5)
	Isomerases (2)

Membrane Protein Annotation

	PDBTM (19)
	MemProtMD (17)
	mpstruc (11)
	OPM (7)

Symmetry Type

	Asymmetric (131)
	Cyclic (100)
	Dihedral (33)
	Helical (3)

SCOP Classification

	Membrane and cell surface proteins and peptides (18)
	All alpha proteins (55)
	Alpha and beta proteins (a+b) (65)
	All beta proteins (58)
	Alpha and beta proteins (a/b) (23)
	Artifacts (15)
	Small proteins (8)
	Multi-domain proteins (alpha and beta) (4)

AllSelected

1 to 25 of 249 Structures

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1A4E \| pdb_00001a4e	Download File View File

CATALASE A FROM SACCHAROMYCES CEREVISIAE

Mate, M.J.

(1999) J Mol Biology 286: 135-149

Released	1999-08-13
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CATALASE A (protein)
Unique Ligands	AZI, HEM, SO4

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1ASQ \| pdb_00001asq	Download File View File

X-RAY STRUCTURES AND MECHANISTIC IMPLICATIONS OF THREE FUNCTIONAL DERIVATIVES OF ASCORBATE OXIDASE FROM ZUCCHINI: REDUCED-, PEROXIDE-, AND AZIDE-FORMS

Messerschmidt, A., Luecke, H., Huber, R.

(1993) J Mol Biology 230: 997-1014

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Cucurbita melopepo
Macromolecule	ASCORBATE OXIDASE (protein)
Unique Ligands	AZI, CU, NAG, OH

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1AVM \| pdb_00001avm	Download File View File

THE CAMBIALISTIC SUPEROXIDE DISMUTASE (FE-SOD) OF P. SHERMANII COORDINATED BY AZIDE

Schmidt, M., Parak, F.

(1998) Inorganica Chim Acta 275-276: 65-72

Released	1998-03-18
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	SUPEROXIDE DISMUTASE (protein)
Unique Ligands	AZI, FE

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1AVN \| pdb_00001avn	Download File View File

HUMAN CARBONIC ANHYDRASE II COMPLEXED WITH THE HISTAMINE ACTIVATOR

Briganti, F., Mangani, S., Orioli, P., Scozzafava, A., Vernaglione, G., Supuran, C.T.

(1997) Biochemistry 36: 10384-10392

Released	1997-12-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	CARBONIC ANHYDRASE II (protein)
Unique Ligands	AZI, HG, HSM, ZN

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1AZI \| pdb_00001azi	Download File View File

MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE COMPLEXED WITH AZIDE

Maurus, R., Brayer, G.D.

(1998) Biochem J 332: 67-74

Released	1998-02-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Equus caballus
Macromolecule	MYOGLOBIN (protein)
Unique Ligands	AZI, HEM, SO4

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1BJE \| pdb_00001bje	Download File View File

H64T VARIANT OF MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE COMPLEXED WITH AZIDE

Maurus, R., Brayer, G.D.

(1998) Biochem J 332: 67-74

Released	1998-01-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Equus caballus
Macromolecule	MYOGLOBIN (protein)
Unique Ligands	AZI, HEM, SO4

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1CVA \| pdb_00001cva	Download File View File

STRUCTURAL AND FUNCTIONAL IMPORTANCE OF A CONSERVED HYDROGEN BOND NETWORK IN HUMAN CARBONIC ANHYDRASE II

Ippolito, J.A., Christianson, D.W.

(1993) J Biological Chem 268: 27458-27466

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	CARBONIC ANHYDRASE II (protein)
Unique Ligands	AZI, ZN

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1EKJ \| pdb_00001ekj	Download File View File

THE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF BETA CARBONIC ANHYDRASE FROM THE C3 DICOT PISUM SATIVUM

Kimber, M.S., Pai, E.F.

(2000) EMBO J 19: 1407-1418

Released	2000-06-07
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Pisum sativum
Macromolecule	BETA-CARBONIC ANHYDRASE (protein)
Unique Ligands	ACT, AZI, CIT, CL, CU, EDO, ZN

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1FS9 \| pdb_00001fs9	Download File View File

CYTOCHROME C NITRITE REDUCTASE FROM WOLINELLA SUCCINOGENES-AZIDE COMPLEX

Einsle, O., Stach, P., Messerschmidt, A., Simon, J., Kroeger, A., Huber, R., Kroneck, P.M.H.

(2000) J Biological Chem 275: 39608-39616

Released	2001-01-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Wolinella succinogenes
Macromolecule	CYTOCHROME C NITRITE REDUCTASE (protein)
Unique Ligands	AZI, CA, HEC, Y1

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1I3E \| pdb_00001i3e	Download File View File

HUMAN AZIDO-MET HEMOGLOBIN BART'S (GAMMA4)

Kidd, R.D., Baker, H.M., Mathews, A.J., Brittain, T., Baker, E.N.

(2001) Protein Sci 10: 1739-1749

Released	2001-09-12
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Homo sapiens
Macromolecule	HEMOGLOBIN GAMMA CHAINS (protein)
Unique Ligands	AZI, HEM

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1ISC \| pdb_00001isc	Download File View File

STRUCTURE-FUNCTION IN E. COLI IRON SUPEROXIDE DISMUTASE: COMPARISONS WITH THE MANGANESE ENZYME FROM T. THERMOPHILUS

Lah, M.S., Dixon, M., Pattridge, K.A., Stallings, W.C., Fee, J.A., Ludwig, M.L.

(1995) Biochemistry 34: 1646-1660

Released	1994-09-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	IRON(III) SUPEROXIDE DISMUTASE (protein)
Unique Ligands	AZI, FE

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1IVJ \| pdb_00001ivj	Download File View File

Crystal Structure of Rat Hemeoxygenase-1 in Complex with Heme and Azide.

Sugishima, M., Sakamoto, H., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.

(2002) J Biological Chem 277: 45086-45090

Released	2002-12-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Hemeoxygenase-1 (protein)
Unique Ligands	AZI, HEM

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1JKV \| pdb_00001jkv	Download File View File

Crystal Structure of Manganese Catalase from Lactobacillus plantarum complexed with azide

Barynin, V.V., Whittaker, M.M., Antonyuk, S.V., Lamzin, V.S., Harrison, P.M., Artymiuk, P.J., Whittaker, J.W.

(2001) Structure 9: 725-738

Released	2002-07-13
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Lactiplantibacillus plantarum
Macromolecule	pseudocatalase (protein)
Unique Ligands	AZI, CA, EDO, MN3, OH

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1KOP \| pdb_00001kop	Download File View File

NEISSERIA GONORRHOEAE CARBONIC ANHYDRASE

Huang, S., Xue, Y., Chirica, L., Lindskog, S., Jonsson, B.-H.

(1998) J Mol Biology 283: 301-310

Released	1998-12-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Neisseria gonorrhoeae
Macromolecule	CARBONIC ANHYDRASE (protein)
Unique Ligands	AZI, BME, SO4, ZN

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1LKP \| pdb_00001lkp	Download File View File

Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form, azide adduct

Jin, S., Kurtz Jr., D.M., Liu, Z.J., Rose, J., Wang, B.C.

(2002) J Am Chem Soc 124: 9845-9855

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Nitratidesulfovibrio vulgaris
Macromolecule	Rubrerythrin (protein)
Unique Ligands	AZI, FE2

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1MNG \| pdb_00001mng	Download File View File

STRUCTURE-FUNCTION IN E. COLI IRON SUPEROXIDE DISMUTASE: COMPARISONS WITH THE MANGANESE ENZYME FROM T. THERMOPHILUS

Lah, M.S., Dixon, M., Pattridge, K.A., Stallings, W.C., Fee, J.A., Ludwig, M.L.

(1995) Biochemistry 34: 1646-1660

Released	1994-10-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermus thermophilus
Macromolecule	MANGANESE SUPEROXIDE DISMUTASE (protein)
Unique Ligands	AZI, MN

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1NEG \| pdb_00001neg	Download File View File

Crystal Structure Analysis of N-and C-terminal labeled SH3-domain of alpha-Chicken Spectrin

Mueller, U., Buessow, K., Diehl, A., Niesen, F.H., Nyarsik, L., Heinemann, U.

(2003) J Struct Funct Genomics 4: 217-225

Released	2003-01-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Gallus gallus
Macromolecule	Spectrin alpha chain, brain (protein)
Unique Ligands	AZI

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1NXD \| pdb_00001nxd	Download File View File

Crystal structure of MnMn Concanavalin A

Lopez-Jaramillo, F.J., Gonzalez-Ramirez, L.A., Albert, A., Santoyo-Gonzalez, F., Vargas-Berenguel, A., Otalora, F.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1048-1056

Released	2004-03-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Canavalia ensiformis
Macromolecule	concanavalin A (protein)
Unique Ligands	AZI, GOL, MN, NA

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1OCZ \| pdb_00001ocz	Download File View File

BOVINE HEART CYTOCHROME C OXIDASE IN AZIDE-BOUND STATE

Tsukihara, T., Yao, M.

(1998) Science 280: 1723-1729

Released	1999-07-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 13
Unique Ligands	AZI, CU, HEA, MG, NA, ZN

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1ONK \| pdb_00001onk	Download File View File

Mistletoe lectin I from viscum album

Gabdoulkhakov, A.G., Savoshkina, Y., Krauspenhaar, R., Stoeva, S., Konareva, N., Kornilov, V., Kornev, A.N., Voelter, W., Nikonov, S.V., Betzel, C., Mikhailov, A.M.

To be published

Released	2004-02-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Viscum album
Macromolecule	Beta-galactoside specific lectin I A chain (protein) Galactose specific lectin I B chain (protein)
Unique Ligands	AZI, GOL, NAG, PO4

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1OPM \| pdb_00001opm	Download File View File

OXIDIZED (CU2+) PEPTIDYLGLYCINE ALPHA-HYDROXYLATING MONOOXYGENASE (PHM) WITH BOUND SUBSTRATE

Prigge, S.T., Amzel, L.M.

(1999) Nat Struct Biol 6: 976-983

Released	1999-09-29
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (PEPTIDYLGLYCINE ALPHA-HYDROXYLATING MONOOXYGENASE) (protein)
Unique Ligands	AZI, CU, GOL, IYG, NI

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1OQ4 \| pdb_00001oq4	Download File View File

The Crystal Structure of the Complex between Stearoyl Acyl Carrier Protein Desaturase from Ricinus Communis (Castor Bean) and Azide.

Moche, M., Ghoshal, A.K., Shanklin, J., Lindqvist, Y.

(2003) J Biological Chem 278: 25072-25080

Released	2003-05-13
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Ricinus communis
Macromolecule	Acyl-[acyl-carrier protein] desaturase (protein)
Unique Ligands	AZI, FE

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1OS2 \| pdb_00001os2	Download File View File

Ternary enzyme-product-inhibitor complexes of human MMP12

Bertini, I., Calderone, V., Fragai, M., Luchinat, C., Mangani, S., Terni, B.

(2003) Angew Chem Int Ed Engl 42: 2673-2676

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Macrophage metalloelastase (protein)
Unique Ligands	ACT, AZI, CA, HAE, ZN

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1PHM \| pdb_00001phm	Download File View File

PEPTIDYLGLYCINE ALPHA-HYDROXYLATING MONOOXYGENASE (PHM) FROM RAT

Prigge, S.T., Amzel, L.M.

(1997) Science 278: 1300-1305

Released	1998-11-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	PEPTIDYLGLYCINE ALPHA-HYDROXYLATING MONOOXYGENASE (protein)
Unique Ligands	AZI, CU, GOL

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1PP9 \| pdb_00001pp9	Download File View File

Bovine cytochrome bc1 complex with stigmatellin bound

Huang, L.S., Cobessi, D., Tung, E.Y., Berry, E.A.

(2005) J Mol Biology 351: 573-597

Released	2004-07-20
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 10
Unique Ligands	AZI, CDL, FES, GOL, HEC, HEM, JZR, PEE, PO4, SMA, UQ

1 to 25 of 249 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1A4E | pdb_00001a4e

1ASQ | pdb_00001asq

1AVM | pdb_00001avm

1AVN | pdb_00001avn

1AZI | pdb_00001azi

1BJE | pdb_00001bje

1CVA | pdb_00001cva

1EKJ | pdb_00001ekj

1FS9 | pdb_00001fs9

1I3E | pdb_00001i3e

1ISC | pdb_00001isc

1IVJ | pdb_00001ivj

1JKV | pdb_00001jkv

1KOP | pdb_00001kop

1LKP | pdb_00001lkp

1MNG | pdb_00001mng

1NEG | pdb_00001neg

1NXD | pdb_00001nxd

1OCZ | pdb_00001ocz

1ONK | pdb_00001onk

1OPM | pdb_00001opm

1OQ4 | pdb_00001oq4

1OS2 | pdb_00001os2

1PHM | pdb_00001phm

1PP9 | pdb_00001pp9