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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 297 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (297)

Scientific Name of Source Organism

	Homo sapiens (144)
	Bos taurus (66)
	Human poliovirus 1 Mahoney (19)
	Trypanosoma brucei (14)
	Trypanosoma brucei brucei TREU927 (13)
	Human immunodeficiency virus 1 (9)
	Schistosoma mansoni (8)
	Saccharomyces cerevisiae S288C (4)
	Escherichia coli (3)
	Chlamydomonas reinhardtii (2)

More...

Taxonomy

	Eukaryota (259)
	Riboviria (29)
	Bacteria (7)
	Duplodnaviria (1)
	Varidnaviria (1)

Experimental Method

X-RAY DIFFRACTION (297)

Polymer Entity Type

Protein (297)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (32)
	2.0 - 2.5 (171)
	2.5 - 3.0 (81)
	3.0 - 3.5 (7)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (11)
	2005 - 2009 (26)
	2010 - 2014 (121)
	2015 - 2019 (103)
	2020 - 2024 (33)
	2025 - 2029 (2)

Enzyme Classification Name

	Oxidoreductases (68)
	Transferases (40)
	Ligases (28)
	Hydrolases (12)
	Lyases (3)

Membrane Protein Annotation

OPM (2)

Symmetry Type

	Asymmetric (210)
	Cyclic (96)
	Dihedral (1)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a+b) (119)
	All beta proteins (34)
	Alpha and beta proteins (a/b) (42)
	All alpha proteins (41)
	Artifacts (44)
	Multi-domain proteins (alpha and beta) (20)
	Coiled coil proteins (1)

AllSelected

1 to 25 of 297 Polymer Entities

Page 1 of 12

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1BHL: Entity 1	Download File View File

CACODYLATED CATALYTIC DOMAIN OF HIV-1 INTEGRASE

Maignan, S., Guilloteau, J.P., Zhou-Liu, Q., Clement-Mella, C., Mikol, V.

(1998) J Mol Biology 282: 359-368

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.2 Å
Chain ID	A
Organism	Human immunodeficiency virus 1
Macromolecule	HIV-1 INTEGRASE

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1FF3: Entity 1	Download File View File

STRUCTURE OF THE PEPTIDE METHIONINE SULFOXIDE REDUCTASE FROM ESCHERICHIA COLI

Tete-Favier, F., Cobessi, D., Boschi-Muller, S., Azza, S., Branlant, G., Aubry, A.

(2000) Structure 8: 1167-1178

Released	2000-12-06
Method	X-RAY DIFFRACTION 1.9 Å
Chain IDs	A, B, C
Organism	Escherichia coli
Macromolecule	PEPTIDE METHIONINE SULFOXIDE REDUCTASE

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1FU1: Entity 1	Download File View File

CRYSTAL STRUCTURE OF HUMAN XRCC4

Junop, M., Modesti, M., Guarne, A., Gellert, M., Yang, W.

(2000) EMBO J 19: 5962-5970

Released	2000-12-11
Method	X-RAY DIFFRACTION 2.7 Å
Chain IDs	A, B
Organism	Homo sapiens
Macromolecule	DNA REPAIR PROTEIN XRCC4

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1FYW: Entity 1	Download File View File

CRYSTAL STRUCTURE OF THE TIR DOMAIN OF HUMAN TLR2

Xu, Y., Tao, X., Shen, B., Horng, T., Medzhitov, R., Manley, J.L., Tong, L., Northeast Structural Genomics Consortium (NESG)

(2000) Nature 408: 111-115

Released	2000-11-22
Method	X-RAY DIFFRACTION 3 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	TOLL-LIKE RECEPTOR 2

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1FYX: Entity 1	Download File View File

CRYSTAL STRUCTURE OF P681H MUTANT OF TIR DOMAIN OF HUMAN TLR2

Xu, Y., Tao, X., Shen, B., Horng, T., Medzhitov, R., Manley, J.L., Tong, L.

(2000) Nature 408: 111-115

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.8 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	TOLL-LIKE RECEPTOR 2

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1I83: Entity 1	Download File View File

BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH N1,N14-BIS((S-METHYL)ISOTHIOUREIDO)TETRADECANE (H4B FREE)

Raman, C.S., Li, H., Martasek, P., Babu, B.R., Griffith, O.W., Masters, B.S.S., Poulos, T.L.

(2001) J Biological Chem 276: 26486-26491

Released	2001-08-08
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B
Organism	Bos taurus
Macromolecule	NITRIC OXIDE SYNTHASE

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1JQ6: Entity 1	Download File View File

HUMAN CYTOMEGALOVIRUS PROTEASE DIMER-INTERFACE MUTANT, S225Y

Batra, R., Khayat, R., Tong, L.

(2001) Nat Struct Biol 8: 810-817

Released	2001-09-12
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Human betaherpesvirus 5
Macromolecule	ASSEMBLIN

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1R4X: Entity 1	Download File View File

Crystal Structure Analys of the Gamma-COPI Appendage domain

Watson, P.J., Frigerio, G., Collins, B.M., Duden, R., Owen, D.J.

(2004) Traffic 5: 79-88

Released	2003-10-28
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	Coatomer gamma subunit

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1RA6: Entity 1	Download File View File

Poliovirus Polymerase Full Length Apo Structure

Thompson, A.A., Peersen, O.B.

(2004) EMBO J 23: 3462-3471

Released	2004-08-17
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	Genome polyprotein

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1RA7: Entity 1	Download File View File

Poliovirus Polymerase with GTP

Thompson, A.A., Peersen, O.B.

(2004) EMBO J 23: 3462-3471

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.35 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	Genome polyprotein

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1S6C: Entity 1	Download File View File

Crystal structure of the complex between KChIP1 and Kv4.2 N1-30

Zhou, W., Qian, Y., Kunjilwar, K., Pfaffinger, P.J., Choe, S.

(2004) Neuron 41: 573-586

Released	2004-02-24
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Rattus norvegicus
Macromolecule	Kv4 potassium channel-interacting protein KChIP1b

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1TQL: Entity 1	Download File View File

POLIOVIRUS POLYMERASE G1A MUTANT

Thompson, A.A., Peersen, O.B.

(2004) EMBO J 23: 3462-3471

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Poliovirus 1
Macromolecule	RNA-directed RNA polymerase

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1ZZS: Entity 1	Download File View File

Bovine eNOS N368D single mutant with L-N(omega)-Nitroarginine-(4R)-Amino-L-Proline Amide Bound

Li, H., Flinspach, M.L., Igarashi, J., Jamal, J., Yang, W., Gomez-Vidal, J.A., Litzinger, E.A., Silverman, R.B., Poulos, T.L.

(2005) Biochemistry 44: 15222-15229

Released	2005-12-06
Method	X-RAY DIFFRACTION 1.85 Å
Chain IDs	A, B
Organism	Bos taurus
Macromolecule	Nitric-oxide synthase, endothelial

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1ZZT: Entity 1	Download File View File

Bovine eNOS N368D/V106M double mutant with L-N(omega)-Nitroarginine-(4R)-Amino-L-Proline Amide Bound

Li, H., Flinspach, M.L., Igarashi, J., Jamal, J., Yang, W., Gomez-Vidal, J.A., Litzinger, E.A., Silverman, R.B., Poulos, T.L.

(2005) Biochemistry 44: 15222-15229

Released	2005-12-06
Method	X-RAY DIFFRACTION 2.14 Å
Chain IDs	A, B
Organism	Bos taurus
Macromolecule	Nitric-oxide synthase, endothelial

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2CJW: Entity 1	Download File View File

Crystal structure of the small GTPase Gem (GemDNDCaM) in complex to Mg.GDP

Splingard, A., Menetrey, J., Perderiset, M., Cicolari, J., Hamoudi, F., Cabanie, L., El Marjou, A., Wells, A., Houdusse, A., de Gunzburg, J.

(2007) J Biological Chem 282: 1905

Released	2006-11-09
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	GTP-BINDING PROTEIN GEM

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2CJW: Entity 2	Download File View File

Crystal structure of the small GTPase Gem (GemDNDCaM) in complex to Mg.GDP

Splingard, A., Menetrey, J., Perderiset, M., Cicolari, J., Hamoudi, F., Cabanie, L., El Marjou, A., Wells, A., Houdusse, A., de Gunzburg, J.

(2007) J Biological Chem 282: 1905

Released	2006-11-09
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	B
Organism	Homo sapiens
Macromolecule	GTP-BINDING PROTEIN GEM

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2H77: Entity 1	Download File View File

Crystal structure of human TR alpha bound T3 in monoclinic space group

Nascimento, A.S., Dias, S.M.G., Nunes, F.M., Aparicio, R., Bleicher, L., Ambrosio, A.L.B., Figueira, A.C.M., Santos, M.A.M., Neto, M.O., Fischer, H., Togashi, H.F.M., Craievich, A.F., Garrat, R.C., Baxter, J.D., Webb, P., Polikarpov, I.

(2006) J Mol Biology 360: 586-598

Released	2006-07-25
Method	X-RAY DIFFRACTION 2.33 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	THRA protein

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2H79: Entity 1	Download File View File

Crystal Structure of human TR alpha bound T3 in orthorhombic space group

(2006) J Mol Biology 360: 586-598

Released	2006-07-25
Method	X-RAY DIFFRACTION 1.87 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	THRA protein

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2HMH: Entity 1	Download File View File

Crystal structure of SOCS3 in complex with gp130(pTyr757) phosphopeptide.

Bergamin, E., Wu, J., Hubbard, S.R.

(2006) Structure 14: 1285-1292

Released	2006-08-15
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Mus musculus
Macromolecule	Suppressor of cytokine signaling 3

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2HZE: Entity 2	Download File View File

Crystal structures of a poxviral glutaredoxin in the oxidized and reduced states show redox-correlated structural changes

Bacik, J.P., Hazes, B.

(2007) J Mol Biology 365: 1545-1558

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	B
Organism	Ectromelia virus Moscow
Macromolecule	Glutaredoxin-1

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2ILY: Entity 1	Download File View File

Crystal structure of poliovirus polymerase complexed with ATP and Mg2+

Thompson, A.A., Peersen, O.B.

(2007) J Mol Biology 366: 1459-1474

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.6 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	Poliovirus polymerase

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2ILZ: Entity 1	Download File View File

Crystal structure of poliovirus polymerase complexed with GTP and Mn2+

Thompson, A.A., Peersen, O.B.

(2007) J Mol Biology 366: 1459-1474

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.5 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	poliovirus polymerase

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2IM0: Entity 1	Download File View File

Crystal structure of poliovirus polymerase complexed with CTP and Mg2+

Thompson, A.A., Peersen, O.B.

(2007) J Mol Biology 366: 1459-1474

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.25 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	poliovirus polymerase

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2IM1: Entity 1	Download File View File

Crystal structure of poliovirus polymerase complexed with CTP and Mn2+

Thompson, A.A., Peersen, O.B.

(2007) J Mol Biology 366: 1459-1474

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.5 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	poliovirus polymerase

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2IM2: Entity 1	Download File View File

Crystal structure of poliovirus polymerase complexed with UTP and Mg2+

Thompson, A.A., Peersen, O.B.

(2007) J Mol Biology 366: 1459-1474

Released	2006-12-12
Method	X-RAY DIFFRACTION 2.35 Å
Chain ID	A
Organism	Human poliovirus 1 Mahoney
Macromolecule	poliovirus polymerase

1 to 25 of 297 Polymer Entities

Page 1 of 12

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification