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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Scientific Name of the Source Organism = "Glycine max"

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Search Summary

This query matches 27 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Homo sapiens (23)
	Vicugna pacos (3)
	Clostridium botulinum D phage (2)
	Clostridium pasteurianum (2)
	Escherichia coli BL21(DE3) (2)
	Hathewaya limosa (1)
	Lama glama (1)
	Mus musculus (1)
	Tequatrovirus T4 (1)

Taxonomy

	Eukaryota (24)
	Bacteria (5)
	Duplodnaviria (3)

Experimental Method

	X-RAY DIFFRACTION (24)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (10)
	2.0 - 2.5 (6)
	2.5 - 3.0 (3)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (2)
	2005 - 2009 (4)
	2010 - 2014 (3)
	2015 - 2019 (2)
	2020 - 2024 (15)

Enzyme Classification Name

	Transferases (15)
	Hydrolases (8)

Membrane Protein Annotation

	PDBTM (8)
	MemProtMD (7)
	OPM (4)
	mpstruc (4)

Symmetry Type

	Asymmetric (16)
	Cyclic (11)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	Alpha and beta proteins (a/b) (3)
	Membrane and cell surface proteins and peptides (2)

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1 to 25 of 27 Polymer Entities

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1BXW \| pdb_00001bxw	Download File View File

OUTER MEMBRANE PROTEIN A (OMPA) TRANSMEMBRANE DOMAIN

Schulz, G.E., Pautsch, A.

(1998) Nat Struct Biol 5: 1013-1017

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	PROTEIN (OUTER MEMBRANE PROTEIN A) (protein)
Unique Ligands	C8E

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1JQH \| pdb_00001jqh	Download File View File

IGF-1 receptor kinase domain

Pautsch, A., Zoephel, A., Ahorn, H., Spevak, W., Hauptmann, R., Nar, H.

(2001) Structure 9: 955-965

Released	2002-04-19
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	IGF-1 receptor kinase (protein)
Unique Ligands	ANP, MG, SO4

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1QJP \| pdb_00001qjp	Download File View File

HIGH RESOLUTION STRUCTURE OF THE OUTER MEMBRANE PROTEIN A (OMPA) TRANSMEMBRANE DOMAIN

Pautsch, A., Schulz, G.E.

(2000) J Mol Biology 298: 273

Released	2000-06-30
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	OUTER MEMBRANE PROTEIN A (protein)
Unique Ligands	C8E

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2A78 \| pdb_00002a78	Download File View File

Crystal structure of the C3bot-RalA complex reveals a novel type of action of a bacterial exoenzyme

Pautsch, A., Vogelsgesang, M., Trankle, J., Herrmann, C., Aktories, K.

(2005) EMBO J 24: 3670-3680

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Clostridium botulinum D phage Homo sapiens
Macromolecule	Mono-ADP-ribosyltransferase C3 (protein) Ras-related protein Ral-A (protein)
Unique Ligands	GDP, MG

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2A9K \| pdb_00002a9k	Download File View File

Crystal structure of the C3bot-NAD-RalA complex reveals a novel type of action of a bacterial exoenzyme

Pautsch, A., Vogelsgesang, M., Trankle, J., Herrmann, C., Aktories, K.

(2005) EMBO J 24: 3670-3680

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Clostridium botulinum D phage Homo sapiens
Macromolecule	Mono-ADP-ribosyltransferase C3 (protein) Ras-related protein Ral-A (protein)
Unique Ligands	GDP, MG, NAD

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2QLL \| pdb_00002qll	Download File View File

Human liver glycogen phosphorylase- GL complex

Pautsch, A., Streicher, R., Wissdorf, O., Stadler, N.

(2008) J Biological Chem 283: 8913-8918

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Homo sapiens
Macromolecule	Glycogen phosphorylase, liver form (protein) protein targeting to glycogen - GL (protein)
Unique Ligands	PLP

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3BW8 \| pdb_00003bw8	Download File View File

Crystal structure of the Clostridium limosum C3 exoenzyme

Vogelsgesang, M., Stieglitz, B., Herrmann, C., Pautsch, A., Aktories, K.

(2008) FEBS Lett 582: 1032-1036

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Hathewaya limosa
Macromolecule	Mono-ADP-ribosyltransferase C3 (protein)
Unique Ligands	SO4

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3P0G \| pdb_00003p0g	Download File View File

Structure of a nanobody-stabilized active state of the beta2 adrenoceptor

Rasmussen, S.G.F., Choi, H.-J., Fung, J.J., Pardon, E., Casarosa, P., Chae, P.S., DeVree, B.T., Rosenbaum, D.M., Thian, F.S., Kobilka, T.S., Schnapp, A., Konetzki, I., Sunahara, R.K., Gellman, S.H., Pautsch, A., Steyaert, J., Weis, W.I., Kobilka, B.K.

(2011) Nature 469: 175-180

Released	2011-01-19
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens Lama glama Tequatrovirus T4
Macromolecule	Beta-2 adrenergic receptor, Lysozyme (protein) Camelid Antibody Fragment (protein)
Unique Ligands	P0G

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4BB9 \| pdb_00004bb9	Download File View File

Crystal structure of glucokinase regulatory protein complexed to fructose-1-phosphate

Pautsch, A., Stadler, N., Loehle, A., Lenter, M., Rist, W., Berg, A., Glocker, L., Nar, H., Reinert, D., Heckel, A., Schnapp, G., Kauschke, S.G.

(2013) Biochemistry 52: 3523

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Homo sapiens
Macromolecule	GLUCOKINASE REGULATORY PROTEIN (protein)
Unique Ligands	CA, F1P

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4BBA \| pdb_00004bba	Download File View File

Crystal structure of glucokinase regulatory protein complexed to phosphate

Pautsch, A., Stadler, N., Loehle, A., Lenter, M., Rist, W., Berg, A., Glocker, L., Nar, H., Reinhart, D., Heckel, A., Schnapp, G., Kauschke, S.G.

(2013) Biochemistry 52: 3523

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	GLUCOKINASE REGULATORY PROTEIN (protein)
Unique Ligands	PO4

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6GPS \| pdb_00006gps	Download File View File

CRYSTAL STRUCTURE OF CCR2A IN COMPLEX WITH MK-0812

Pautsch, A., Schnapp, G.

(2019) Structure 27: 427-438.e5

Released	2019-01-02
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Clostridium pasteurianum Homo sapiens
Macromolecule	C-C chemokine receptor type 2,Rubredoxin,C-C chemokine receptor type 2 (protein)
Unique Ligands	F7N, ZN

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6GPX \| pdb_00006gpx	Download File View File

CRYSTAL STRUCTURE OF CCR2A IN COMPLEX WITH MK-0812

Pautsch, A., Schnapp, G., Cheng, R., Apel, A.

(2019) Structure 27: 427-438.e5

Released	2019-01-02
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Clostridium pasteurianum Homo sapiens
Macromolecule	C-C chemokine receptor type 2,Rubredoxin,C-C chemokine receptor type 2 (protein)
Unique Ligands	F7N, OLA, ZN

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7QXY \| pdb_00007qxy	Download File View File

X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 3

Dahms, S.O., Brandstetter, H., Pautsch, A.

(2022) ACS Chem Biol 17: 816-821

Released	2022-04-20
Method	X-RAY DIFFRACTION 1.478 Å
Organisms	Homo sapiens
Macromolecule	Furin (protein)
Unique Ligands	CA, CL, I1G, NA

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7QXZ \| pdb_00007qxz	Download File View File

X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 5

Dahms, S.O., Brandstetter, H., Pautsch, A.

(2022) ACS Chem Biol 17: 816-821

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Furin (protein)
Unique Ligands	CA, CL, I0M, NA

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7QY0 \| pdb_00007qy0	Download File View File

X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 1

Dahms, S.O., Brandstetter, H., Pautsch, A.

(2022) ACS Chem Biol 17: 816-821

Released	2022-04-20
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens
Macromolecule	Furin (protein)
Unique Ligands	CA, CL, DMS, I0T, NA, NAG

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7QY1 \| pdb_00007qy1	Download File View File

X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 4

Dahms, S.O., Brandstetter, H., Pautsch, A.

(2022) ACS Chem Biol 17: 816-821

Released	2022-04-20
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	Furin (protein)
Unique Ligands	CA, CL, DMS, I0W, NA, NAG

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7QY2 \| pdb_00007qy2	Download File View File

X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 2

Dahms, S.O., Brandstetter, H., Pautsch, A.

(2022) ACS Chem Biol 17: 816-821

Released	2022-04-20
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Furin (protein)
Unique Ligands	CA, CL, DMS, I0Q, NA, NAG

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8OMD \| pdb_00008omd	Download File View File

Crystal structure of mKHK in complex with compound-4

Ebenhoch, R., Pautsch, A.

(2023) Acta Crystallogr D Struct Biol 79: 871-880

Released	2023-09-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	Ketohexokinase (protein)
Unique Ligands	VTJ

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8OME \| pdb_00008ome	Download File View File

Crystal structure of hKHK-A in complex with compound-4

Ebenhoch, R., Pautsch, A.

(2023) Acta Crystallogr D Struct Biol 79: 871-880

Released	2023-09-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	VTJ

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8OMF \| pdb_00008omf	Download File View File

Crystal structure of hKHK-C in complex with compound-4

Ebenhoch, R., Pautsch, A.

(2023) Acta Crystallogr D Struct Biol 79: 871-880

Released	2023-09-27
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	SO4, VTJ

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8OMJ \| pdb_00008omj	Download File View File

hKHK-C in complex with compound 28

Pautsch, A., Ebenhoch, R.

(2024) Bioorg Med Chem Lett 112: 129930-129930

Released	2024-07-10
Method	X-RAY DIFFRACTION 1.978 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	SO4, VTM

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8OMK \| pdb_00008omk	Download File View File

hKHK-C in complex with ADP & fructose 1-phosphate

Ebenhoch, R., Pautsch, A.

(2024) Bioorg Med Chem Lett 112: 129930-129930

Released	2024-01-10
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	ADP, F1X, SO4

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8QZ6 \| pdb_00008qz6	Download File View File

Structure of human ceramide synthase 6 (CerS6) bound to C16:0

Pascoa, T.C., Pike, A.C.W., Chi, G., Stefanic, S., Quigley, A., Chalk, R., Mukhopadhyay, S.M.M., Venkaya, S., Dix, C., Moreira, T., Tessitore, A., Cole, V., Chu, A., Elkins, J.M., Pautsch, A., Schnapp, G., Carpenter, E.P., Sauer, D.B.

(2025) Nat Struct Mol Biol 32: 431-440

Released	2024-11-13
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens Vicugna pacos
Macromolecule	Isoform 2 of Ceramide synthase 6 (protein) Nanobody-22 (protein)
Unique Ligands	NAG, PC1, PLM

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8QZ7 \| pdb_00008qz7	Download File View File

Structure of human ceramide synthase 6 (CerS6) in complex with N-palmitoyl fumonisin B1

(2025) Nat Struct Mol Biol 32: 431-440

Released	2024-11-13
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens Vicugna pacos
Macromolecule	Isoform 2 of Ceramide synthase 6 (protein) Nanobody-22 (protein)
Unique Ligands	NAG, PC1, XBX

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9EOT \| pdb_00009eot	Download File View File

Structure of human ceramide synthase 6 (CerS6) bound to C16:0 (nanobody Nb02)

(2025) Nat Struct Mol Biol 32: 431-440

Released	2024-11-13
Method	ELECTRON MICROSCOPY 3.02 Å
Organisms	Homo sapiens Vicugna pacos
Macromolecule	Isoform 2 of Ceramide synthase 6 (protein) Nanobody-02 (protein)
Unique Ligands	NAG, PC1, PLM

1 to 25 of 27 Polymer Entities

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BXW | pdb_00001bxw

1JQH | pdb_00001jqh

1QJP | pdb_00001qjp

2A78 | pdb_00002a78

2A9K | pdb_00002a9k

2QLL | pdb_00002qll

3BW8 | pdb_00003bw8

3P0G | pdb_00003p0g

4BB9 | pdb_00004bb9

4BBA | pdb_00004bba

6GPS | pdb_00006gps

6GPX | pdb_00006gpx

7QXY | pdb_00007qxy

7QXZ | pdb_00007qxz

7QY0 | pdb_00007qy0

7QY1 | pdb_00007qy1

7QY2 | pdb_00007qy2

8OMD | pdb_00008omd

8OME | pdb_00008ome

8OMF | pdb_00008omf

8OMJ | pdb_00008omj

8OMK | pdb_00008omk

8QZ6 | pdb_00008qz6

8QZ7 | pdb_00008qz7

9EOT | pdb_00009eot