RCSB PDB: Search

1IRQ \| pdb_00001irq	Download File View File

Crystal structure of omega transcriptional repressor at 1.5A resolution

Murayama, K., Orth, P., De La Hoz, A.B., Alonso, J.C., Saenger, W.

(2001) J Mol Biology 314: 789-796

Released	2001-12-12
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes
Macromolecule	omega transcriptional repressor (protein)

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1J27 \| pdb_00001j27	Download File View File

Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution

Seto, A., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2003) Proteins 53: 768-771

Released	2003-12-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermus thermophilus HB8
Macromolecule	hypothetical protein TT1725 (protein)

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1UDX \| pdb_00001udx	Download File View File

Crystal structure of the conserved protein TT1381 from Thermus thermophilus HB8

Kukimoto-Niino, M., Shirouzu, M., Murayama, K., Inoue, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2004) J Mol Biology 337: 761-770

Released	2004-03-16
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Thermus thermophilus HB8
Macromolecule	the GTP-binding protein Obg (protein)
Unique Ligands	ACT, MPD

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1UF3 \| pdb_00001uf3	Download File View File

Crystal structure of TT1561 of thermus thermophilus HB8

Kato-Murayama, M., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-11-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT1561 (protein)
Unique Ligands	CA

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1UF9 \| pdb_00001uf9	Download File View File

Crystal structure of TT1252 from Thermus thermophilus

Seto, A., Murayama, K., Toyama, M., Ebihara, A., Nakagawa, N., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) Proteins 58: 235-242

Released	2003-11-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermus thermophilus
Macromolecule	TT1252 protein (protein)
Unique Ligands	ATP, PO4

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1UFA \| pdb_00001ufa	Download File View File

Crystal structure of TT1467 from Thermus thermophilus HB8

Idaka, M., Terada, T., Murayama, K., Yamaguchi, H., Nureki, O., Ishitani, R., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-11-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermus thermophilus
Macromolecule	TT1467 protein (protein)

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1UFB \| pdb_00001ufb	Download File View File

Crystal structure of TT1696 from Thermus thermophilus HB8

Idaka, M., Murayama, K., Yamaguchi, H., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-11-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermus thermophilus
Macromolecule	TT1696 protein (protein)

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1UFO \| pdb_00001ufo	Download File View File

Crystal Structure of TT1662 from Thermus thermophilus

Murayama, K., Shirouzu, M., Terada, T., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) Proteins 58: 982-984

Released	2003-12-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT1662 (protein)

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1V6Z \| pdb_00001v6z	Download File View File

Crystal structure of TT1573 from Thermus thermophilus

Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-12-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus HB8
Macromolecule	hypothetical protein TTHA0657 (protein)

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1V8Q \| pdb_00001v8q	Download File View File

Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8

Wang, H., Takemoto-Hori, C., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2004) Protein Sci 13: 2806-2810

Released	2004-07-13
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermus thermophilus
Macromolecule	TT0826 (protein)
Unique Ligands	DTT

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1WCW \| pdb_00001wcw	Download File View File

Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-1 crystal)

Mizohata, E., Matsuura, T., Sakai, H., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-05-06
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Thermus thermophilus
Macromolecule	Uroporphyrinogen III synthase (protein)
Unique Ligands	GOL

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1WCX \| pdb_00001wcx	Download File View File

Crystal Structure of Mutant Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (L75M/I193M/L248M, SeMet derivative, Form-1 crystal)

Mizohata, E., Matsuura, T., Murayama, K., Sakai, H., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-05-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus
Macromolecule	Uroporphyrinogen III Synthase (protein)
Unique Ligands	GOL

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1WD5 \| pdb_00001wd5	Download File View File

Crystal structure of TT1426 from Thermus thermophilus HB8

Shibata, R., Kukimoto-Niino, M., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) Protein Sci 14: 823-827

Released	2004-11-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT1426 (protein)
Unique Ligands	MES

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1WD7 \| pdb_00001wd7	Download File View File

Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-2 crystal)

Mizohata, E., Matsuura, T., Sakai, H., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-11-12
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermus thermophilus
Macromolecule	Uroporphyrinogen III Synthase (protein)

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1WDE \| pdb_00001wde	Download File View File

Crystal structure of the conserved hypothetical protein APE0931 from Aeropyrum pernix K1

Kishishita, S., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2008) Acta Crystallogr D Biol Crystallogr 64: 397-406

Released	2004-11-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aeropyrum pernix
Macromolecule	Probable diphthine synthase (protein)

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1WDI \| pdb_00001wdi	Download File View File

Crystal Structure Of TT0907 From Thermus Thermophilus HB8

Idaka, M., Yagi, H., Murayama, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-11-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT0907 (protein)
Unique Ligands	CIT

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1WDJ \| pdb_00001wdj	Download File View File

Crystal structure of TT1808 from Thermus thermophilus HB8

Idaka, M., Wada, T., Murayama, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-11-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT1808 (protein)

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1WDT \| pdb_00001wdt	Download File View File

Crystal structure of ttk003000868 from Thermus thermophilus HB8

Wang, H., Takemoto-Hori, C., Murayama, K., Sekine, S., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-05-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermus thermophilus
Macromolecule	elongation factor G homolog (protein)
Unique Ligands	GTP, MG

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1WDV \| pdb_00001wdv	Download File View File

Crystal structure of hypothetical protein APE2540

Murayama, K., Kato-Murayama, M., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 26-29

Released	2004-11-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Aeropyrum pernix K1
Macromolecule	hypothetical protein APE2540 (protein)

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1WDZ \| pdb_00001wdz	Download File View File

Crystal structure of RCB domain of IRSp53

Murayama, K., Suetsugu, S., Seto, A., Shirouzu, M., Takenawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-06-07
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Homo sapiens
Macromolecule	insulin receptor substrate p53 (protein)

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1WEH \| pdb_00001weh	Download File View File

Crystal structure of the conserved hypothetical protein TT1887 from Thermus thermophilus HB8

Kukimoto-Niino, M., Murayama, K., Idaka, M., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2004) Protein Sci 13: 3038-3042

Released	2004-11-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Conserved hypothetical protein TT1887 (protein)

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1WEK \| pdb_00001wek	Download File View File

Crystal structure of the conserved hypothetical protein TT1465 from Thermus thermophilus HB8

Kukimoto-Niino, M., Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2004) Protein Sci 13: 3038-3042

Released	2004-11-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermus thermophilus
Macromolecule	hypothetical protein TT1465 (protein)
Unique Ligands	PO4

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1WG8 \| pdb_00001wg8	Download File View File

Crystal structure of a predicted S-adenosylmethionine-dependent methyltransferase TT1512 from Thermus thermophilus HB8.

Kishishita, S., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-11-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus
Macromolecule	predicted S-adenosylmethionine-dependent methyltransferase (protein)
Unique Ligands	SAM