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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Ascaris suum"

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Search Summary

This query matches 44 Structures.

Refinements

Structure Determination Methodology

experimental (44)

Scientific Name of Source Organism

	Ascaris suum (44)
	Homo sapiens (3)
	Sus scrofa (2)

Taxonomy

Eukaryota (44)

Experimental Method

	X-RAY DIFFRACTION (33)
	SOLUTION NMR (11)

Polymer Entity Type

Protein (44)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (10)
	2.5 - 3.0 (7)
	3.0 - 3.5 (7)
	3.5 - 4.0 (1)

Release Date

	1990 - 1994 (4)
	1995 - 1999 (5)
	2000 - 2004 (4)
	2005 - 2009 (6)
	2010 - 2014 (7)
	2015 - 2019 (15)
	2020 - 2024 (3)

Enzyme Classification Name

	Oxidoreductases (14)
	Hydrolases (3)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (12)
	PDBTM (12)
	OPM (6)
	mpstruc (2)

Symmetry Type

	Asymmetric (34)
	Cyclic (5)
	Dihedral (6)

SCOP Classification

	All beta proteins (10)
	Alpha and beta proteins (a+b) (13)
	All alpha proteins (10)
	Alpha and beta proteins (a/b) (5)
	Small proteins (5)
	Artifacts (1)

AllSelected

1 to 25 of 44 Structures

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1ASH \| pdb_00001ash	Download File View File

THE STRUCTURE OF ASCARIS HEMOGLOBIN DOMAIN I AT 2.2 ANGSTROMS RESOLUTION: MOLECULAR FEATURES OF OXYGEN AVIDITY

Yang, J., Mathews, F.S., Kloek, A.P., Goldberg, D.E.

(1995) Proc Natl Acad Sci U S A 92: 4224-4228

Released	1995-02-27
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Ascaris suum
Macromolecule	HEMOGLOBIN (OXY) (protein)
Unique Ligands	HEM, OXY

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1ATA \| pdb_00001ata	Download File View File

HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE

Clore, G.M., Grasberger, B.L., Gronenborn, A.M.

(1994) Structure 2: 669-678

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ASCARIS TRYPSIN INHIBITOR (protein)

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1ATB \| pdb_00001atb	Download File View File

HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE

Clore, G.M., Grasberger, B.L., Gronenborn, A.M.

(1994) Structure 2: 669-678

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ASCARIS TRYPSIN INHIBITOR (protein)

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1ATD \| pdb_00001atd	Download File View File

HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE

Clore, G.M., Grasberger, B.L., Gronenborn, A.M.

(1994) Structure 2: 669-678

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ASCARIS TRYPSIN INHIBITOR (protein)

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1ATE \| pdb_00001ate	Download File View File

HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE

Clore, G.M., Grasberger, B.L., Gronenborn, A.M.

(1994) Structure 2: 669-678

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ASCARIS TRYPSIN INHIBITOR (protein)

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1EAI \| pdb_00001eai	Download File View File

COMPLEX OF ASCARIS CHYMOTRPSIN/ELASTASE INHIBITOR WITH PORCINE ELASTASE

Huang, K., Strynadka, N.C.J., Bernard, V.D., Peanasky, R.J., James, M.N.G.

(1994) Structure 2: 679-689

Released	1999-04-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Ascaris suum Sus scrofa
Macromolecule	PROTEIN (CHYMOTRYPSIN/ELASTASE ISOINHIBITOR 1) (protein) PROTEIN (ELASTASE) (protein)

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1F32 \| pdb_00001f32	Download File View File

CRYSTAL STRUCTURE OF ASCARIS PEPSIN INHIBITOR-3

Ng, K.K., Petersen, J.F., Cherney, M.M., Garen, C., James, M.N.

(2000) Nat Struct Biol 7: 653-657

Released	2001-02-01
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Ascaris suum
Macromolecule	MAJOR PEPSIN INHIBITOR PI-3 (protein)

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1F34 \| pdb_00001f34	Download File View File

CRYSTAL STRUCTURE OF ASCARIS PEPSIN INHIBITOR-3 BOUND TO PORCINE PEPSIN

Ng, K.K., Petersen, J.F., Cherney, M.M., Garen, C., James, M.N.

(2000) Nat Struct Biol 7: 653-657

Released	2001-02-01
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Ascaris suum Sus scrofa
Macromolecule	MAJOR PEPSIN INHIBITOR PI-3 (protein) PEPSIN A (protein)
Unique Ligands	MPD

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1LLQ \| pdb_00001llq	Download File View File

Crystal Structure of Malic Enzyme from Ascaris suum Complexed with Nicotinamide Adenine Dinucleotide

Coleman, D.E., Jagannatha, G.S., Goldsmith, E.J., Cook, P.F., Harris, B.G.

(2002) Biochemistry 41: 6928-6938

Released	2002-05-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Ascaris suum
Macromolecule	NAD-dependent malic enzyme (protein)
Unique Ligands	NAD

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1MSP \| pdb_00001msp	Download File View File

MAJOR SPERM PROTEIN, ALPHA ISOFORM (RECOMBINANT), PH 4.6

Bullock, T.L., Roberts, T.M., Stewart, M.

(1996) J Mol Biology 263: 284-296

Released	1996-12-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Ascaris suum
Macromolecule	MAJOR SPERM PROTEIN (protein)

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1O0S \| pdb_00001o0s	Download File View File

Crystal Structure of Ascaris suum Malic Enzyme Complexed with NADH

Rao, G.S., Coleman, D.E., Karsten, W.E., Cook, P.F., Harris, B.G.

(2003) J Biological Chem 278: 38051-38058

Released	2003-07-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Ascaris suum
Macromolecule	NAD-dependent malic enzyme (protein)
Unique Ligands	NAI, TTN

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1X3X \| pdb_00001x3x	Download File View File

Crystal Structure of Cytochrome b5 from Ascaris suum

Yokota, T., Nakajima, Y., Yamakura, F., Sugio, S., Hashimoto, M., Takamiya, S., Aoki, T.

(2006) Biochem J 394: 437-447

Released	2006-06-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Ascaris suum
Macromolecule	Cytochrome b5 (protein)
Unique Ligands	HEM, SO4

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2BJQ \| pdb_00002bjq	Download File View File

Crystal structure of the nematode sperm cell motility protein MFP2

Grant, R.P., Buttery, S.M., Ekman, G.C., Roberts, T.M., Stewart, M.

(2005) J Mol Biology 347: 583

Released	2005-03-16
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Ascaris suum
Macromolecule	MFP2A (protein)

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2BJR \| pdb_00002bjr	Download File View File

Crystal structure of the nematode sperm cell motility protein MFP2B

Grant, R.P., Buttery, S.M., Ekman, G.C., Roberts, T.M., Stewart, M.

(2005) J Mol Biology 347: 583

Released	2005-03-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Ascaris suum
Macromolecule	MFP2B (protein)
Unique Ligands	SO4, ZN

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2BVU \| pdb_00002bvu	Download File View File

D83R mutant of Asaris suum major sperm protein (MSP)

Stewart, M., Grant, R.P., Roberts, T.M.

(2008) Proc Natl Acad Sci U S A 105: 5390

Released	2006-10-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Ascaris suum
Macromolecule	MAJOR SPERM PROTEIN, ISOFORM ALPHA (protein)

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2D56 \| pdb_00002d56	Download File View File

Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum

Nakano, M., Aizawa, T., Kamiya, M., Miura, K., Kumaki, Y., Demura, M., Tsuda, S., Kawano, K.

To be published

Released	2006-11-14
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ASABF (protein)

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2MSP \| pdb_00002msp	Download File View File

MAJOR SPERM PROTEIN, BETA ISOFORM, ENGINEERED C59S/T90C MUTANT, PUTATIVE SUBFILAMENT STRUCTURE, PH 8.5

Bullock, T.L., Mccoy, A.J., Stewart, M.

(1998) Nat Struct Biol 5: 184-189

Released	1998-04-15
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Ascaris suum
Macromolecule	MAJOR SPERM PROTEIN (protein)

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2N92 \| pdb_00002n92	Download File View File

Solution structure of cecropin P1 with LPS

Baek, M., Kamiya, M., Kushibiki, T., Nakazumi, T., Tomisawa, S., Abe, C., Kumaki, Y., Kikukawa, T., Demura, M., Kawano, K., Aizawa, T.

To be published

Released	2016-11-09
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	Cecropin-P1 (protein)

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2XV9 \| pdb_00002xv9	Download File View File

The solution structure of ABA-1A saturated with oleic acid

Smith, B.O., Kennedy, M.W., Cooper, A., Meenan, N.A.G., Bromek, K.

(2011) PLoS Negl Trop Dis 5: e1040-e1040

Released	2011-08-10
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	ABA-1A1 REPEAT UNIT (protein)

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3FJU \| pdb_00003fju	Download File View File

Ascaris suum carboxypeptidase inhibitor in complex with human carboxypeptidase A1

Sanglas, L., Aviles, F.X., Huber, R., Gomis-Ruth, F.X., Arolas, J.L.

(2009) Proc Natl Acad Sci U S A 106: 1743-1747

Released	2008-12-30
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Ascaris suum Homo sapiens
Macromolecule	Carboxypeptidase A inhibitor (protein) Carboxypeptidase A1 (protein)
Unique Ligands	ACT, CAC, NA, ZN

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3M93 \| pdb_00003m93	Download File View File

Complex crystal structure of Ascaris suum eIF4E-3 with m7G cap

Liu, W., Berkeley Structural Genomics Center (BSGC)

(2011) Nucleic Acids Res 39: 8820-8832

Released	2011-07-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Ascaris suum Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E-binding protein 1 (protein) Translation initiation factor 4E (protein)
Unique Ligands	M7G

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3M94 \| pdb_00003m94	Download File View File

Complex crystal structure of Ascaris suum eIF4E-3 with m2,2,7G cap

Liu, W., Berkeley Structural Genomics Center (BSGC)

(2011) Nucleic Acids Res 39: 8820-8832

Released	2011-07-20
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Ascaris suum Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E-binding protein 1 (protein) Translation initiation factor 4E (protein)
Unique Ligands	ACE, M7M

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3MSP \| pdb_00003msp	Download File View File

MOTILE MAJOR SPERM PROTEIN (MSP) OF ASCARIS SUUM, NMR, 20 STRUCTURES

Haaf, A., Leclaire III, L., Roberts, G., Kent, H.M., Roberts, T.M., Stewart, M., Neuhaus, D.

(1998) J Mol Biology 284: 1611-1624

Released	1999-04-20
Method	SOLUTION NMR
Organisms	Ascaris suum
Macromolecule	MAJOR SPERM PROTEIN (protein)

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3VR8 \| pdb_00003vr8	Download File View File

Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum

Shimizu, H., Shiba, T., Inaoka, D.K., Osanai, A., Kita, K., Sakamoto, K., Harada, S.

(2012) J Biochem 151: 589-592

Released	2012-07-11
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Ascaris suum
Macromolecule	Cytochrome b-large subunit (protein) Flavoprotein subunit of complex II (protein) Iron-sulfur subunit of succinate dehydrogenase (protein) Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (protein)
Unique Ligands	EPH, F3S, FAD, FES, HEM, MLI, RQX, SF4

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3VR9 \| pdb_00003vr9	Download File View File

Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor flutolanil

Shimizu, H., Shiba, T., Inaoka, D.K., Osanai, A., Kita, K., Sakamoto, K., Harada, S.

To be published

Released	2013-04-10
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Ascaris suum
Macromolecule	Cytochrome b-large subunit (protein) Flavoprotein subunit of complex II (protein) Iron-sulfur subunit of succinate dehydrogenase (protein) Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (protein)
Unique Ligands	EPH, F3S, FAD, FES, FTN, HEM, MLI, SF4

1 to 25 of 44 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ASH | pdb_00001ash

1ATA | pdb_00001ata

1ATB | pdb_00001atb

1ATD | pdb_00001atd

1ATE | pdb_00001ate

1EAI | pdb_00001eai

1F32 | pdb_00001f32

1F34 | pdb_00001f34

1LLQ | pdb_00001llq

1MSP | pdb_00001msp

1O0S | pdb_00001o0s

1X3X | pdb_00001x3x

2BJQ | pdb_00002bjq

2BJR | pdb_00002bjr

2BVU | pdb_00002bvu

2D56 | pdb_00002d56

2MSP | pdb_00002msp

2N92 | pdb_00002n92

2XV9 | pdb_00002xv9

3FJU | pdb_00003fju

3M93 | pdb_00003m93

3M94 | pdb_00003m94

3MSP | pdb_00003msp

3VR8 | pdb_00003vr8

3VR9 | pdb_00003vr9