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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "TRANSLOCASE"

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Search Summary

This query matches 261 Structures.

Refinements

Structure Determination Methodology

experimental (261)

Scientific Name of Source Organism

	Homo sapiens (67)
	Mus musculus (22)
	Saccharomyces cerevisiae S288C (21)
	Saccharomyces cerevisiae (17)
	Spinacia oleracea (15)
	Mycolicibacterium smegmatis MC2 155 (13)
	Bacillus sp. PS3 (10)
	Bacillus subtilis subsp. subtilis str. 168 (8)
	Escherichia coli K-12 (8)
	Legionella pneumophila (8)

More...

Taxonomy

	Eukaryota (149)
	Bacteria (114)
	other sequences (4)
	Monodnaviria (2)
	Archaea (1)

Experimental Method

	ELECTRON MICROSCOPY (227)
	X-RAY DIFFRACTION (34)

Polymer Entity Type

	Protein (261)
	DNA (6)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (16)
	2.5 - 3.0 (58)
	3.0 - 3.5 (80)
	3.5 - 4.0 (52)
	4.0 - 4.5 (27)
	> 4.5 (22)

Release Date

	2015 - 2019 (20)
	2020 - 2024 (219)
	2025 - 2029 (22)

Enzyme Classification Name

	Translocases (121)
	Hydrolases (35)
	Transferases (9)
	Oxidoreductases (3)
	Lyases (5)
	Isomerases (3)

Membrane Protein Annotation

	PDBTM (153)
	mpstruc (123)
	OPM (103)
	MemProtMD (73)

Symmetry Type

	Asymmetric (178)
	Cyclic (82)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (4)
	All beta proteins (3)
	All alpha proteins (1)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 25 of 261 Structures

Page 1 of 11

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6JNF \| pdb_00006jnf	Download File View File

Cryo-EM structure of the translocator of the outer mitochondrial membrane

Araiso, Y., Tsutsumi, A., Suzuki, J., Yunoki, K., Kawano, S., Kikkawa, M., Endo, T.

(2019) Nature 575: 395-401

Released	2019-10-16
Method	ELECTRON MICROSCOPY 3.81 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Mitochondrial import receptor subunit TOM22 (protein) Mitochondrial import receptor subunit TOM40 (protein) Mitochondrial import receptor subunit TOM5 (protein) Mitochondrial import receptor subunit TOM6 (protein) Mitochondrial import receptor subunit TOM7 (protein)
Unique Ligands	46E

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6N6L \| pdb_00006n6l	Download File View File

Crystal Structure of ATPase delta 1-79 Spa47 R189A R191A mutant

Morales, Y., Johnson, S.J., Demler, H.J., Dickenson, N.E.

(2019) Proteins 87: 931-942

Released	2019-06-19
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Shigella flexneri
Macromolecule	ATP synthase SpaL/MxiB (protein)
Unique Ligands	SO4

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6N6M \| pdb_00006n6m	Download File View File

Crystal Structure of ATPase delta1-79 Spa47 R189A

Morales, Y., Johnson, S.J., Demler, H.J., Dickenson, N.E.

(2019) Proteins 87: 931-942

Released	2019-06-19
Method	X-RAY DIFFRACTION 2.788 Å
Organisms	Shigella flexneri
Macromolecule	ATP synthase SpaL/MxiB (protein)
Unique Ligands	SO4

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6N71 \| pdb_00006n71	Download File View File

Crystal Structure of ATPase delta1-79 Spa47 R191E

Morales, Y., Olsen, K.J., Johnson, S.J., Demler, H.J., Dickenson, N.E.

(2019) Proteins 87: 931-942

Released	2019-06-19
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Shigella flexneri
Macromolecule	Probable ATP synthase SpaL/MxiB (protein)

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6NYY \| pdb_00006nyy	Download File View File

human m-AAA protease AFG3L2, substrate-bound

Lander, G.C., Puchades, C.

(2019) Mol Cell 75: 1073

Released	2019-05-22
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens
Macromolecule	AFG3-like protein 2 (protein) Substrate (protein)
Unique Ligands	ADP, ANP, MG, ZN

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6O1W \| pdb_00006o1w	Download File View File

Structure of pCW3 conjugation coupling protein TcpA monomer orthorhombic crystal form

Traore, D.A.K., Ahktar, N., Torres, V.T., Adams, V., Coulibaly, F., Panjikar, S., Caradoc-Davies, T.T., Rood, J.I., Whisstock, J.C.

To be published

Released	2020-02-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Clostridium perfringens
Macromolecule	DNA translocase coupling protein (protein)
Unique Ligands	BGC

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6O1X \| pdb_00006o1x	Download File View File

Structure of pCW3 conjugation coupling protein TcpA monomer form with ATPgS

Traore, D.A.K., Ahktar, N., Torres, V.T., Adams, V., Coulibaly, F., Panjikar, S., Caradoc-Davies, T.T., Rood, J.I., Whisstock, J.C.

To be published

Released	2020-02-26
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Clostridium perfringens
Macromolecule	DNA translocase coupling protein (protein)
Unique Ligands	AGS, BGC

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6O1Y \| pdb_00006o1y	Download File View File

Structure of pCW3 conjugation coupling protein TcpA monomeric form with ATP

Traore, D.A.K., Ahktar, N., Torres, V.T., Adams, V., Coulibaly, F., Panjikar, S., Caradoc-Davies, T.T., Rood, J.I., Whisstock, J.C.

To be published

Released	2020-02-26
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Clostridium perfringens
Macromolecule	DNA translocase coupling protein (protein)
Unique Ligands	ATP, BGC

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6O1Z \| pdb_00006o1z	Download File View File

Structure of pCW3 conjugation coupling protein TcpA hexagonal crystal form

Traore, D.A.K., Ahktar, N., Torres, V.T., Adams, V., Coulibaly, F., Panjikar, S., Caradoc-Davies, T.T., Rood, J.I., Whisstock, J.C.

To be published

Released	2020-03-04
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Clostridium perfringens
Macromolecule	DNA translocase coupling protein (protein)

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6ODI \| pdb_00006odi	Download File View File

Structure of CagY from a cryo-EM reconstruction of a T4SS

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Helicobacter pylori
Macromolecule	Type IV secretion system apparatus protein CagY (protein)

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6ODJ \| pdb_00006odj	Download File View File

PolyAla Model of the PRC from the Type 4 Secretion System of H. pylori

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Helicobacter pylori
Macromolecule	PolyAla Model of PRC from H.pylori (protein)

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6OEE \| pdb_00006oee	Download File View File

Structure of CagT from a cryo-EM reconstruction of a T4SS

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Helicobacter pylori
Macromolecule	Type IV secretion system apparatus protein CagT (protein)

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6OEF \| pdb_00006oef	Download File View File

PolyAla Model of the O-layer from the Type 4 Secretion System of H. pylori

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Helicobacter pylori
Macromolecule	PolyAla Model of OMCC O-Layer (protein)

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6OEG \| pdb_00006oeg	Download File View File

Structure of CagX from a cryo-EM reconstruction of a T4SS

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Helicobacter pylori
Macromolecule	Type IV secretion system apparatus protein CagX (protein)

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6OEH \| pdb_00006oeh	Download File View File

PolyAla Model of OMCC I-Layer

Chung, J.M., Sheedlo, M.J., Campbell, A., Sawhney, N., Frick-Cheng, A.E., Lacy, D.B., Cover, T.L., Ohi, M.D.

(2019) Elife 8:

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Helicobacter pylori
Macromolecule	PolyAla Model of OMCC I-Layer (protein)

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6PNV \| pdb_00006pnv	Download File View File

1.42 Angstrom Resolution Crystal Structure of Translocation Protein TolB from Salmonella enterica

Minasov, G., Shuvalova, L., Dubrovska, I., Kiryukhina, O., Endres, M., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2019-07-17
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4
Macromolecule	Tol-Pal system protein TolB (protein)
Unique Ligands	K, NA

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6PSN \| pdb_00006psn	Download File View File

Anthrax toxin protective antigen channels bound to lethal factor

Hardenbrook, N.J., Liu, S., Zhou, K., Zhou, Z.H., Krantz, B.A.

(2020) Nat Commun 11: 840-840

Released	2020-03-04
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Bacillus anthracis
Macromolecule	Lethal factor (protein) Protective antigen (protein)
Unique Ligands	CA

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6PSX \| pdb_00006psx	Download File View File

Cryo-EM structure of S. cerevisiae Drs2p-Cdc50p in the PI4P-activated form

Bai, L., Li, H.

(2019) Nat Commun 10: 4142-4142

Released	2019-09-25
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Saccharomyces cerevisiae W303
Macromolecule	Cell division control protein 50 (protein) Probable phospholipid-transporting ATPase DRS2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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6PSY \| pdb_00006psy	Download File View File

Cryo-EM structure of S. cerevisiae Drs2p-Cdc50p in the autoinhibited apo form

Bai, L., Li, H.

(2019) Nat Commun 10: 4142-4142

Released	2019-09-25
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Saccharomyces cerevisiae W303
Macromolecule	Cell division control protein 50 (protein) Probable phospholipid-transporting ATPase DRS2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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6RLL \| pdb_00006rll	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJ44064146

Brown, D.G., Robinson, C.M., Pande, V.

To be published

Released	2020-06-03
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Homo sapiens
Macromolecule	Methylosome protein 50 (protein) Protein arginine N-methyltransferase 5 (protein)
Unique Ligands	K8H

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6RLQ \| pdb_00006rlq	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJ45031882

Brown, D.G., Robinson, C.M., Pande, V.

To be published

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Homo sapiens
Macromolecule	Methylosome protein 50 (protein) Protein arginine N-methyltransferase 5 (protein)
Unique Ligands	K8N

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6RO4 \| pdb_00006ro4	Download File View File

Structure of the core TFIIH-XPA-DNA complex

Kokic, G., Chernev, A., Tegunov, D., Dienemann, C., Urlaub, H., Cramer, P.

(2019) Nat Commun 10: 2885-2885

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 7 Unique nucleic acid chains: 2
Unique Ligands	SF4, ZN

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6SH3 \| pdb_00006sh3	Download File View File

Structure of the ADP state of the heptameric Bcs1 AAA-ATPase

Kater, L., Beckmann, R.

(2020) Nat Struct Mol Biol 27: 142-149

Released	2020-02-05
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Mitochondrial chaperone BCS1 (protein)
Unique Ligands	ADP