Download MendeleyCrystal structure of urate oxidase from Bacillus SP.
Hibi, T., Nago, T., Nishiya, Y., Oda, J.To be published.
1J2G
Crystal structure of Urate oxidase from Bacillus SP. TB-90 co-crystallized with 8-Azaxanthine
- PDB DOI: https://doi.org/10.2210/pdb1J2G/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus sp. TB-90
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2003-01-05 Released: 2004-06-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.218
- R-Value Work: 0.180
- R-Value Observed: 0.182
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uricase | 319 | Bacillus sp. TB-90 | Mutation(s): 0 EC: 1.7.3.3 (PDB Primary Data), 4.1.1.97 (UniProt) |  | |
UniProt | |||||
Find proteins for Q45697 (Bacillus sp. (strain TB-90)) Explore Q45697 Go to UniProtKB: Q45697 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q45697 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| AZA Query on AZA | G [auth A], I [auth B], J [auth C], L [auth D] | 8-AZAXANTHINE C4 H3 N5 O2 KVGVQTOQSNJTJI-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | E [auth A], F [auth A], H [auth B], K [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.218
- R-Value Work: 0.180
- R-Value Observed: 0.182
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 133.39 | α = 90 |
| b = 144.41 | β = 90 |
| c = 78.785 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| SCALA | data scaling |
| MOLREP | phasing |
| REFMAC | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Released Date: 2004-06-15 Deposition Author(s): Hibi, T., Nago, T., Nishiya, Y., Oda, J.
Revision History (Full details and data files)
- Version 1.0: 2004-06-15
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.3: 2023-12-27
Changes: Data collection, Database references, Derived calculations
