Download MendeleyCrystal structure of a domain of transmembrane protein of ABC-type oligopeptide transport system from Bartonella henselae str. Houston-1"
Nocek, B., Stein, A., Mack, J., Buck, K., Joachimiak, A.To be published.
3PAM
Crystal structure of a domain of transmembrane protein of ABC-type oligopeptide transport system from Bartonella henselae str. Houston-1
- PDB DOI: https://doi.org/10.2210/pdb3PAM/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Bartonella henselae
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2010-10-19 Released: 2010-11-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.31 Å
- R-Value Free: 0.257
- R-Value Work: 0.223
- R-Value Observed: 0.225
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Transmembrane protein | 259 | Bartonella henselae | Mutation(s): 0 Gene Names: BH08740 |  | |
UniProt | |||||
Find proteins for A0A0H3LXD4 (Bartonella henselae (strain ATCC 49882 / DSM 28221 / CCUG 30454 / Houston 1)) Explore A0A0H3LXD4 Go to UniProtKB: A0A0H3LXD4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3LXD4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EOH Query on EOH | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | ETHANOL C2 H6 O LFQSCWFLJHTTHZ-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.31 Å
- R-Value Free: 0.257
- R-Value Work: 0.223
- R-Value Observed: 0.225
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 100.847 | α = 90 |
| b = 39.715 | β = 92.28 |
| c = 101.353 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| Auto-Rickshaw | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2010-11-17 Deposition Author(s): Nocek, B., Stein, A., Mack, J., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2010-11-17
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description - Version 1.3: 2024-10-16
Changes: Data collection, Database references, Derived calculations, Structure summary
