Crystal structure of IpgC in complex with a follow-up compound based on J20
Gardonyi, M., Heine, A., Klebe, G.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Chaperone protein IpgC | 143 | Shigella flexneri | Mutation(s): 0  Gene Names: ipgC, ippI, CP0129 | ||
UniProt | |||||
Find proteins for P0A2U4 (Shigella flexneri) Explore P0A2U4  Go to UniProtKB:  P0A2U4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A2U4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
2IY Query on 2IY | E [auth B] | 3-(4-chlorophenyl)-5-methylsulfanyl-1~{H}-pyrazole-4-carbonitrile C11 H8 Cl N3 S KRQSUBRVYHNKPM-UHFFFAOYSA-N | |||
PGE Query on PGE | G [auth B] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
DMS Query on DMS | C [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
CL Query on CL | D [auth A], F [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.788 | α = 90 |
b = 57.788 | β = 90 |
c = 160.301 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Coot | model building |