Download MendeleyCrystal structure of an uncharacterized protein from Chlorobium tepidum
Bonanno, J.B., Dickey, M., Bain, K.T., Powell, A., Ozyurt, S., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3E0S | pdb_00003e0s
Crystal structure of an uncharacterized protein from Chlorobium tepidum
- PDB DOI: https://doi.org/10.2210/pdb3E0S/pdb
- Classification: structural genomics, unknown function
- Organism(s): Chlorobaculum tepidum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-07-31 Released: 2008-08-26
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.09 Å
- R-Value Free: 0.272 (Depositor), 0.270 (DCC)
- R-Value Work: 0.218 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.221 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| uncharacterized protein | 326 | Chlorobaculum tepidum | Mutation(s): 0 Gene Names: CT0884 |  | |
UniProt | |||||
Find proteins for Q8KE09 (Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)) Explore Q8KE09 Go to UniProtKB: Q8KE09 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8KE09 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth A], E [auth A], F [auth B], G [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.09 Å
- R-Value Free: 0.272 (Depositor), 0.270 (DCC)
- R-Value Work: 0.218 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.221 (Depositor)
Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 33.74 | α = 90 |
| b = 212.477 | β = 106.94 |
| c = 55.424 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MAR345 | data collection |
| DENZO | data reduction |
| SHELXCD | phasing |
| SHELXE | model building |
Entry History
Deposition Data
- Released Date: 2008-08-26 Deposition Author(s): Bonanno, J.B., Dickey, M., Bain, K.T., Powell, A., Ozyurt, S., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2008-08-26
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2018-11-14
Changes: Data collection, Structure summary - Version 1.4: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.5: 2024-02-21
Changes: Data collection, Database references
