Download MendeleyThe X-ray crystal structure of STAPHYLOCOCCUS AUREUS Fatty Acid Kinase (Fak) B1 protein F263T mutant to 2.18 Angstrom resolution
Cuypers, M.G., Gullett, J.M., Subramanian, C., White, S.W., Rock, C.O.To be published.
6NYU | pdb_00006nyu
The X-ray crystal structure of Staphylococcus aureus Fatty Acid Kinase (Fak) B1 F263T mutant protein to 2.18 Angstrom resolution
- PDB DOI: https://doi.org/10.2210/pdb6NYU/pdb
- Classification: TRANSFERASE
- Organism(s): Staphylococcus aureus
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2019-02-12 Released: 2020-02-12
- Funding Organization(s): National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.18 Å
- R-Value Free: 0.243 (Depositor), 0.240 (DCC)
- R-Value Work: 0.183 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.186 (Depositor)
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DegV domain-containing protein | 288 | Staphylococcus aureus | Mutation(s): 1 Gene Names: BTN44_08795, CV021_09110, EP54_02745, EQ90_03735, ERS072840_01626, HMPREF3211_01094, NCTC10654_00855, NCTC11940_00723, NCTC13131_00828, NCTC13196_00435... |  | |
UniProt | |||||
Find proteins for P0A0N2 (Staphylococcus aureus) Explore P0A0N2 Go to UniProtKB: P0A0N2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A0N2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PLM (Subject of Investigation/LOI) Query on PLM | E [auth A], G [auth B] | PALMITIC ACID C16 H32 O2 IPCSVZSSVZVIGE-UHFFFAOYSA-N |  | ||
| MYR (Subject of Investigation/LOI) Query on MYR | C [auth A], F [auth B] | MYRISTIC ACID C14 H28 O2 TUNFSRHWOTWDNC-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | D [auth A], H [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.18 Å
- R-Value Free: 0.243 (Depositor), 0.240 (DCC)
- R-Value Work: 0.183 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.186 (Depositor)
Diffraction Data: https://doi.org/10.18430/m36nyu
Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 32.846 | α = 105.05 |
| b = 54.09 | β = 90 |
| c = 83.729 | γ = 107.67 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-02-12 Deposition Author(s): Cuypers, M.G., Gullett, J.M., Subramanian, C., White, S.W., Rock, C.O.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI) | United States | -- |
Revision History (Full details and data files)
- Version 1.0: 2020-02-12
Type: Initial release - Version 1.1: 2023-10-11
Changes: Data collection, Database references, Refinement description
