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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "mukE"

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Photorhabdus thracensis (13)
	Escherichia coli BL21(DE3) (8)
	Escherichia coli (7)
	Escherichia phage T7 (2)
	Escherichia coli K-12 (1)
	Shigella flexneri (1)
	[Haemophilus] ducreyi (1)
	[Haemophilus] ducreyi 35000HP (1)
	synthetic construct (1)

Taxonomy

	Bacteria (18)
	Duplodnaviria (2)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (15)
	X-RAY DIFFRACTION (3)

Polymer Entity Type

	Protein (18)
	DNA (8)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	3.0 - 3.5 (1)
	3.5 - 4.0 (3)
	4.0 - 4.5 (4)
	> 4.5 (9)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (1)
	2020 - 2024 (9)
	2025 - 2029 (7)

Symmetry Type

	Asymmetric (13)
	Cyclic (5)

AllSelected

1 to 18 of 18 Structures

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Explore in 3D

3EUK \| pdb_00003euk	Download File View File

Crystal structure of MukE-MukF(residues 292-443)-MukB(head domain)-ATPgammaS complex, asymmetric dimer

Woo, J.S., Lim, J.H., Shin, H.C., Oh, B.H.

(2009) Cell 136: 85-96

Released	2009-01-20
Method	X-RAY DIFFRACTION 4 Å
Organisms	[Haemophilus] ducreyi [Haemophilus] ducreyi 35000HP
Macromolecule	Chromosome partition protein mukB, Linker (protein) Chromosome partition protein mukE (protein) Chromosome partition protein mukF (protein)
Unique Ligands	AGS, MG

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3RPU \| pdb_00003rpu	Download File View File

Crystal structure of the MukE-MukF complex

Guarne, A., Gloyd, M., Ghirlando, R.

(2011) J Mol Biology 412: 578-590

Released	2012-03-14
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Chromosome partition protein mukE (protein) Chromosome partition protein mukF (protein)

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7NYW \| pdb_00007nyw	Download File View File

Cryo-EM structure of the MukBEF-MatP-DNA head module

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3
Unique Ligands	ATP, MG, PNS

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7NYX \| pdb_00007nyx	Download File View File

Cryo-EM structure of the MukBEF-MatP-DNA monomer (closed conformation)

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis synthetic construct
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3
Unique Ligands	ATP, MG, PNS

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7NYY \| pdb_00007nyy	Download File View File

Cryo-EM structure of the MukBEF monomer

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 6.8 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Acyl carrier protein (protein) Chromosome partition protein MukB (protein) Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein)
Unique Ligands	PNS

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7NYZ \| pdb_00007nyz	Download File View File

Cryo-EM structure of the MukBEF-MatP-DNA monomer (partially open conformation)

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 6.5 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3
Unique Ligands	ATP, MG, PNS

Explore in 3D

7NZ0 \| pdb_00007nz0	Download File View File

Cryo-EM structure of the MukBEF-MatP-DNA monomer (open conformation)

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 6.3 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3
Unique Ligands	ATP, MG, PNS

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7NZ2 \| pdb_00007nz2	Download File View File

Cryo-EM structure of the MukBEF-MatP-DNA tetrad

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 11 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2
Unique Ligands	ATP, MG, PNS

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7NZ3 \| pdb_00007nz3	Download File View File

Cryo-EM structure of apposed MukBEF-MatP monomers on DNA

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 11 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2
Unique Ligands	ATP, MG, PNS

Explore in 3D

7NZ4 \| pdb_00007nz4	Download File View File

Cryo-EM structure of the MukBEF dimer

Buermann, F., Lowe, J.

(2021) Mol Cell 81: 4891-4906.e8

Released	2021-07-07
Method	ELECTRON MICROSCOPY 13 Å
Organisms	Escherichia coli BL21(DE3) Photorhabdus thracensis
Macromolecule	Acyl carrier protein (protein) Chromosome partition protein MukB (protein) Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein)
Unique Ligands	PNS

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7V8P \| pdb_00007v8p	Download File View File

Crystal Structure of the MukE dimer

Qian, J.W., Guo, L.

(2021) Biochem Biophys Res Commun 589: 229-233

Released	2022-01-05
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Shigella flexneri
Macromolecule	Chromosome partition protein MukE (protein)

Explore in 3D

9GM6 \| pdb_00009gm6	Download File View File

MukBEF in a nucleotide-bound state with open neck gate (heads core)

Burmann, F., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Escherichia coli Photorhabdus thracensis
Macromolecule	Acyl carrier protein (protein) Chromosome partition protein MukB (protein) Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein)
Unique Ligands	ATP, MG

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9GM7 \| pdb_00009gm7	Download File View File

MukBEF in a nucleotide-bound state with open neck gate (monomer)

Burmann, F., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Escherichia coli Photorhabdus thracensis
Macromolecule	Acyl carrier protein (protein) Chromosome partition protein MukB (protein) Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein)
Unique Ligands	ATP, MG

Explore in 3D

9GM8 \| pdb_00009gm8	Download File View File

MukBEF in a nucleotide-bound state with open neck gate

Burmann, F., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Escherichia coli Photorhabdus thracensis
Macromolecule	Acyl carrier protein (protein) Chromosome partition protein MukB (protein) Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein)
Unique Ligands	ATP, MG

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9GM9 \| pdb_00009gm9	Download File View File

MukBEF in a DNA capture state

Burmann, F., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 7.8 Å
Organisms	Escherichia coli Photorhabdus thracensis
Macromolecule	Unique protein chains: 4 Unique nucleic acid chains: 2
Unique Ligands	ATP, MG

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9GMA \| pdb_00009gma	Download File View File

MukBEF in a DNA capture state (dimer)

Burmann, F., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 9.1 Å
Organisms	Escherichia coli Photorhabdus thracensis
Macromolecule	Unique protein chains: 4 Unique nucleic acid chains: 2
Unique Ligands	ATP, MG

Explore in 3D

9GMB \| pdb_00009gmb	Download File View File

MukEF in complex with the phage protein gp5.9

Burmann, F., Wilkinson, O., Kimanius, D., Dillingham, M., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Escherichia coli Escherichia phage T7
Macromolecule	Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein) Probable RecBCD inhibitor gp5.9 (protein)

Explore in 3D

9GMD \| pdb_00009gmd	Download File View File

MukEF in complex with the phage protein gp5.9 (focus)

Burmann, F., Wilkinson, O., Kimanius, D., Dillingham, M., Lowe, J.

(2025) Cell

Released	2025-03-26
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Escherichia coli Escherichia phage T7
Macromolecule	Chromosome partition protein MukE (protein) Chromosome partition protein MukF (protein) Probable RecBCD inhibitor gp5.9 (protein)

1 to 18 of 18 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3EUK | pdb_00003euk

Crystal structure of MukE-MukF(residues 292-443)-MukB(head domain)-ATPgammaS complex, asymmetric dimer

3RPU | pdb_00003rpu

Crystal structure of the MukE-MukF complex

7NYW | pdb_00007nyw

Cryo-EM structure of the MukBEF-MatP-DNA head module

7NYX | pdb_00007nyx

Cryo-EM structure of the MukBEF-MatP-DNA monomer (closed conformation)

7NYY | pdb_00007nyy

Cryo-EM structure of the MukBEF monomer

7NYZ | pdb_00007nyz

Cryo-EM structure of the MukBEF-MatP-DNA monomer (partially open conformation)

7NZ0 | pdb_00007nz0

Cryo-EM structure of the MukBEF-MatP-DNA monomer (open conformation)

7NZ2 | pdb_00007nz2

Cryo-EM structure of the MukBEF-MatP-DNA tetrad

7NZ3 | pdb_00007nz3

Cryo-EM structure of apposed MukBEF-MatP monomers on DNA

7NZ4 | pdb_00007nz4

Cryo-EM structure of the MukBEF dimer

7V8P | pdb_00007v8p

Crystal Structure of the MukE dimer

9GM6 | pdb_00009gm6

MukBEF in a nucleotide-bound state with open neck gate (heads core)

9GM7 | pdb_00009gm7

MukBEF in a nucleotide-bound state with open neck gate (monomer)

9GM8 | pdb_00009gm8

MukBEF in a nucleotide-bound state with open neck gate

9GM9 | pdb_00009gm9

MukBEF in a DNA capture state

9GMA | pdb_00009gma

MukBEF in a DNA capture state (dimer)

9GMB | pdb_00009gmb

MukEF in complex with the phage protein gp5.9

9GMD | pdb_00009gmd

MukEF in complex with the phage protein gp5.9 (focus)

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Structure Determination Methodology

Scientific Name of Source Organism

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Refinement Resolution (Å)

Release Date

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3EUK | pdb_00003euk

3RPU | pdb_00003rpu

7NYW | pdb_00007nyw

7NYX | pdb_00007nyx

7NYY | pdb_00007nyy

7NYZ | pdb_00007nyz

7NZ0 | pdb_00007nz0

7NZ2 | pdb_00007nz2

7NZ3 | pdb_00007nz3

7NZ4 | pdb_00007nz4

7V8P | pdb_00007v8p

9GM6 | pdb_00009gm6

9GM7 | pdb_00009gm7

9GM8 | pdb_00009gm8

9GM9 | pdb_00009gm9

9GMA | pdb_00009gma

9GMB | pdb_00009gmb

9GMD | pdb_00009gmd