1MDC | pdb_00001mdc

CRYSTALLIZATION, STRUCTURE DETERMINATION AND LEAST-SQUARES REFINEMENT TO 1.75 ANGSTROMS RESOLUTION OF THE FATTY-ACID-BINDING PROTEIN ISOLATED FROM MANDUCA SEXTA L

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1mdca_ All beta proteins Lipocalins Lipocalins Fatty acid binding protein-like Fatty acid-binding protein tobacco hornworm (Manduca sexta ) [TaxId: 7130 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyFatty acid binding protein-like 8030282 4002547 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLipocalins 8042661 3001332 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALipocalin_7e1mdcA1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: Lipocalin_7ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.128.20 Mainly Beta Beta Barrel Lipocalin Calycin beta-barrel core domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00061Lipocalin / cytosolic fatty-acid binding protein family (Lipocalin)Lipocalin / cytosolic fatty-acid binding protein familyLipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
INSECT FATTY ACID BINDING PROTEIN -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR012674CalycinHomologous Superfamily
IPR000463Cytosolic fatty-acid bindingDomain
IPR031259Intracellular lipid binding proteinFamily
IPR000566Lipocalin/cytosolic fatty-acid binding domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
ACE RESID:  AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359