1NYJ | pdb_00001nyj

The closed state structure of M2 protein H+ channel by solid state NMR spectroscopy

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1nyjd_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Matrix protein M2 transmembrane peptide	( ) [TaxId: ], (Influenza A virus (strain A/USSR/90/1977 H1N1) ) [TaxId: 381516 ],	SCOPe (2.08)
C	d1nyjc_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Matrix protein M2 transmembrane peptide	( ) [TaxId: ], (Influenza A virus (strain A/USSR/90/1977 H1N1) ) [TaxId: 381516 ],	SCOPe (2.08)
B	d1nyjb_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Matrix protein M2 transmembrane peptide	( ) [TaxId: ], (Influenza A virus (strain A/USSR/90/1977 H1N1) ) [TaxId: 381516 ],	SCOPe (2.08)
A	d1nyja_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Matrix protein M2 transmembrane peptide	( ) [TaxId: ], (Influenza A virus (strain A/USSR/90/1977 H1N1) ) [TaxId: 381516 ],	SCOPe (2.08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Matrix protein M2	passive transmembrane transporter activity monoatomic ion channel activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms viral life cycle symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms viral life cycle symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont entry into host cell viral process symbiont entry into host disruption of anatomical structure in another organism symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host autophagy symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion component virion membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002089	Influenza virus matrix protein 2	Family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.