1W91 | pdb_00001w91

crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from Seleniomethionine

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Hd1w91h1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Hd1w91h2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Gd1w91g1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Gd1w91g2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Fd1w91f1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Fd1w91f2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Ed1w91e1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Ed1w91e2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Dd1w91d1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Dd1w91d2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Cd1w91c1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Cd1w91c2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Bd1w91b1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Bd1w91b2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Ad1w91a1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 Beta-D-xylosidase (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)
Ad1w91a2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Beta-D-xylosidase, catalytic domain (Geobacillus stearothermophilus ) [TaxId: 1422 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
GSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
FSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
ESCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
DSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
CSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2B (2022-06-29)
BSCOP2B Superfamily(Trans)glycosidases 8032984 3000313 SCOP2B (2022-06-29)
ASCOP2 FamilyComposite domain of various glycosyl hydrolase families 8020601 4003957 SCOP2 (2022-06-29)
ASCOP2 Familybeta-glycanases 8020604 4003164 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGlycosyl hydrolase domain-like 8032981 3001528 SCOP2 (2022-06-29)
ASCOP2 Superfamily(Trans)glycosidases 8032984 3000313 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HGlyco_hydro_39_2nde1w91H1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
HGlyco_hydro_3e1w91H2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
GGlyco_hydro_39_2nde1w91G1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
GGlyco_hydro_3e1w91G2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
FGlyco_hydro_39_2nde1w91F1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
FGlyco_hydro_3e1w91F2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
EGlyco_hydro_39_2nde1w91E1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
EGlyco_hydro_3e1w91E2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
DGlyco_hydro_39_2nde1w91D1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
DGlyco_hydro_3e1w91D2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
CGlyco_hydro_39_2nde1w91C1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
CGlyco_hydro_3e1w91C2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
BGlyco_hydro_39_2nde1w91B1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
BGlyco_hydro_3e1w91B2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
AGlyco_hydro_39_2nde1w91A1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Glyco_hydro_39_2ndECOD (1.6)
AGlyco_hydro_3e1w91A2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
H3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
G2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
G3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
F2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
F3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
E2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
E3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
D2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
D3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
C2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
C3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1500 Mainly Beta Sandwich Immunoglobulin-like Glycosyl hydrolase domainCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
BETA-XYLOSIDASE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049166Glycosyl hydrolases family 39, N-terminal catalytic domainDomain
A, B, C, D, E
IPR000514Glycoside hydrolase, family 39Family
A, B, C, D, E
IPR051923Glycosyl Hydrolase Family 39Family
A, B, C, D, E
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C, D, E
IPR049165Glycosyl hydrolases family 39, active siteActive Site