1ZC6 | pdb_00001zc6

Crystal Structure of Putative N-acetylglucosamine Kinase from Chromobacterium violaceum. Northeast Structural Genomics Target Cvr23.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1zc6a2	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Actin-like ATPase domain	BadF/BadG/BcrA/BcrD-like	Probable N-acetylglucosamine kinase CV2896, C-terminal domain	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
A	d1zc6a1	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Actin-like ATPase domain	BadF/BadG/BcrA/BcrD-like	Probable N-acetylglucosamine kinase CV2896, N-terminal domain	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
B	d1zc6b2	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Actin-like ATPase domain	BadF/BadG/BcrA/BcrD-like	Probable N-acetylglucosamine kinase CV2896, C-terminal domain	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)
B	d1zc6b1	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Actin-like ATPase domain	BadF/BadG/BcrA/BcrD-like	Probable N-acetylglucosamine kinase CV2896, N-terminal domain	(Chromobacterium violaceum ATCC 12472 ) [TaxId: 243365 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	BadF/BadG/BcrA/BcrD-like	8023189	4003392	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Actin-like ATPases	8035570	3000092	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Actin-like ATPases	8035569	3000092	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Actin-like ATPases	8035569	3000092	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Actin-like ATPases	8035570	3000092	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	BcrAD_BadFG_N	e1zc6A1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: BcrAD_BadFG_N	ECOD (1.6)
A	BcrAD_BadFG_C	e1zc6A2	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: BcrAD_BadFG_C	ECOD (1.6)
B	BcrAD_BadFG_N	e1zc6B1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: BcrAD_BadFG_N	ECOD (1.6)
B	BcrAD_BadFG_C	e1zc6B2	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: BcrAD_BadFG_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.420.40	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)
B	3.30.420.40	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01869	BadF/BadG/BcrA/BcrD ATPase family (BcrAD_BadFG)	BadF/BadG/BcrA/BcrD ATPase family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	probable N-acetylglucosamine kinase	N-acetylglucosamine kinase activity carbohydrate kinase activity kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR002731	ATPase, BadF/BadG/BcrA/BcrD type	Domain
A, B	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, B	IPR052519	Eukaryotic-type N-acetylglucosamine Kinase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.