2P1G | pdb_00002p1g

Crystal structure of a putative xylanase from Bacteroides fragilis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDUF1460e2p1gB1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: DUF1460ECOD (1.6)
ADUF1460e2p1gA1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: DUF1460ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07313N-acetylmuramoyl-L-alanine amidase-like (AmiA-like)N-acetylmuramoyl-L-alanine amidase-likeThis family includes N-acetylmuramoyl-L-alanine amidase (AMA) from Bacteroides uniformis and similar bacterial proteins. AmiA hydrolyses GlcNAc-1,6-anhydro-MurNAc-peptide into disaccharide and stem peptide. It shows an alpha/beta/alpha three-layered ...This family includes N-acetylmuramoyl-L-alanine amidase (AMA) from Bacteroides uniformis and similar bacterial proteins. AmiA hydrolyses GlcNAc-1,6-anhydro-MurNAc-peptide into disaccharide and stem peptide. It shows an alpha/beta/alpha three-layered sandwich fold with a catalytic core that consists of a central five-stranded beta-sheet and four alpha-helices. It is structurally related to NlpC/P60 gamma- D-Glu-meso-diaminopimelic acid amidases [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage