3RCC | pdb_00003rcc

Crystal Structure of the Streptococcus agalactiae Sortase A

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
R	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Sortase	8089168	3000481	SCOP2B (2022-06-29)
A	SCOP2 Family	Sortase	8089167	4003242	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Sortase	8089168	3000481	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R	Sortase	e3rccR1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
Q	Sortase	e3rccQ1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
P	Sortase	e3rccP1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
O	Sortase	e3rccO1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
N	Sortase	e3rccN1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
M	Sortase	e3rccM1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
L	Sortase	e3rccL1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
K	Sortase	e3rccK1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
J	Sortase	e3rccJ1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
I	Sortase	e3rccI1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
H	Sortase	e3rccH1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
G	Sortase	e3rccG1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
F	Sortase	e3rccF1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
E	Sortase	e3rccE1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
D	Sortase	e3rccD1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
C	Sortase	e3rccC1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
B	Sortase	e3rccB1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
A	Sortase	e3rccA1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
R	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
Q	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
P	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
O	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
N	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
M	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
L	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
K	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
J	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
I	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
H	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
G	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
F	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
E	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
D	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
C	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
B	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
A	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	PF04203	Sortase domain (Sortase)	Sortase domain	The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	Sortase SrtA	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR023365	Sortase domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR042007	Sortase A	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR005754	Sortase family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.