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Binary complex of Bacillus DNA Polymerase I Large Fragment and duplex DNA with rC in primer terminus paired with dG of template External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2B Superfamily Nucleotide cyclase/DNA polymerase palm domain-like 8042337 3001272 SCOP2B (2022-06-29) A SCOP2B Superfamily Ribonuclease H-like 8042336 3000143 SCOP2B (2022-06-29) A SCOP2B Superfamily Nucleotide cyclase/DNA polymerase palm domain-like 8042337 3001272 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A DNA_pol_A_2nd e4dqsA11 A: alpha arrays X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology) H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology) T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I F: DNA_pol_A_2nd ECOD (1.6) A DNA_pol_A_1st e4dqsA12 A: alpha bundles X: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) T: fingers domain in bacteriophage RB69-like DNA polymerase I F: DNA_pol_A_1st ECOD (1.6) A DNA_pol_A_3rd e4dqsA9 A: a+b two layers X: Alpha-beta plaits H: Adenylyl and guanylyl cyclase catalytic domain-like T: Adenylyl and guanylyl cyclase catalytic domain-like F: DNA_pol_A_3rd ECOD (1.6) A DNA_pol_A_exo1_1 e4dqsA10 A: mixed a+b and a/b X: Ribonuclease H-like H: Ribonuclease H-like (From Topology) T: Ribonuclease H-like F: DNA_pol_A_exo1_1 ECOD (1.6)
Chains Polymer Molecular Function Biological Process Cellular Component DNA polymerase - DNA (5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3') - - - DNA/RNA (5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-R(P*C)-3') - - -
Chains Accession Name Type IPR036397 Ribonuclease H superfamily Homologous Superfamily IPR002421 5'-3' exonuclease Domain IPR043502 DNA/RNA polymerase superfamily Homologous Superfamily IPR020045 DNA polymerase I-like, H3TH domain Domain IPR001098 DNA-directed DNA polymerase, family A, palm domain Domain IPR029060 PIN-like domain superfamily Homologous Superfamily IPR054690 DNA polymerase I, 3'-5' exonuclease domain Domain IPR036279 5'-3' exonuclease, C-terminal domain superfamily Homologous Superfamily IPR008918 Helix-hairpin-helix motif, class 2 Conserved Site IPR002298 DNA polymerase A Family IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Domain IPR019760 DNA-directed DNA polymerase, family A, conserved site Conserved Site IPR018320 DNA polymerase 1 Family IPR012337 Ribonuclease H-like superfamily Homologous Superfamily IPR002562 3'-5' exonuclease domain Domain