4V47 | pdb_00004v47

Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth AG]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
I [auth AG]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
H [auth AF]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
F [auth AD]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
SA [auth BS]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
QA [auth BQ]SCOP2 FamilyCold shock DNA-binding domain-like 8102127 4001909 SCOP2 (2022-06-29)
QA [auth BQ]SCOP2 SuperfamilyNucleic acid-binding proteins 8102128 3000135 SCOP2 (2022-06-29)
PA [auth BP]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
KA [auth BK]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
JA [auth BJ]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
HA [auth BH]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
FA [auth BF]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
DA [auth BD]SCOP2 FamilyRibosomal protein S4 8083399 4001399 SCOP2 (2022-06-29)
DA [auth BD]SCOP2 SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2 (2022-06-29)
C [auth AA]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
C [auth AA]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
AA [auth A4]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
Z [auth A1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
W [auth AW]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
V [auth AU]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
U [auth AT]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
T [auth AS]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
S [auth AR]SCOP2 FamilyL23p 8105777 4000943 SCOP2 (2022-06-29)
S [auth AR]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8105778 3000210 SCOP2 (2022-06-29)
R [auth AQ]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
P [auth AN]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
O [auth AM]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
J [auth AH]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth AG]Ribosomal_L11e4v47AG2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
I [auth AG]Ribosomal_L11_Ne4v47AG1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
H [auth AF]Ribosomal_L9_Ne4v47AF1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
G [auth AE]Ribosomal_L6e4v47AE1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth AE]Ribosomal_L6_1e4v47AE2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
F [auth AD]Ribosomal_L5_Ce4v47AD1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
E [auth AC]Ribosomal_L4e4v47AC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
TA [auth BT]Ribosomal_S20pe4v47BT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
SA [auth BS]Ribosomal_S19e4v47BS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
RA [auth BR]Ribosomal_S18e4v47BR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
QA [auth BQ]Ribosomal_S17_1e4v47BQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
PA [auth BP]Ribosomal_S16e4v47BP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
OA [auth BO]Ribosomal_S15_1e4v47BO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
NA [auth BN]Ribosomal_S14e4v47BN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
D [auth AB]Ribosomal_L3e4v47AB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
MA [auth BM]Ribosomal_S13_1e4v47BM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
LA [auth BL]Ribosom_S12_S23e4v47BL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
KA [auth BK]Ribosomal_S11e4v47BK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
JA [auth BJ]Ribosomal_S10e4v47BJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
IA [auth BI]Ribosomal_S9e4v47BI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
HA [auth BH]Ribosomal_S8_Ne4v47BH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
HA [auth BH]Ribosomal_S8_Ce4v47BH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
GA [auth BG]Ribosomal_S7_1e4v47BG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
FA [auth BF]Ribosomal_S6e4v47BF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
EA [auth BE]Ribosomal_S5_Ce4v47BE1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
EA [auth BE]Ribosomal_S5e4v47BE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
DA [auth BD]S4e4v47BD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
C [auth AA]Ribosomal_L2e4v47AA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
C [auth AA]Ribosomal_L2_Ce4v47AA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
CA [auth BC]Ribosomal_S3_Ce4v47BC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
CA [auth BC]KH_2_1e4v47BC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
AA [auth A4]Ribosomal_L36e4v47A41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
Z [auth A1]Ribosomal_L33e4v47A11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
Y [auth AZ]Ribosomal_L32pe4v47AZ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
X [auth AX]Ribosomal_L30e4v47AX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
W [auth AW]Ribosomal_L29e4v47AW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
V [auth AU]Ribosomal_L27e4v47AU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
U [auth AT]Ribosomal_L25pe4v47AT1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
T [auth AS]ribosomal_L24_1e4v47AS1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
S [auth AR]Ribosomal_L23_2e4v47AR1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
R [auth AQ]Ribosomal_L22e4v47AQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
Q [auth AO]Ribosomal_L20e4v47AO1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
P [auth AN]Ribosomal_L19e4v47AN1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
O [auth AM]Ribosomal_L18pe4v47AM1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
N [auth AL]Ribosomal_L17_1e4v47AL1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
M [auth AK]Ribosomal_L16e4v47AK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
L [auth AJ]Ribosomal_L27Ae4v47AJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
K [auth AI]Ribosomal_L14e4v47AI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
J [auth AH]Ribosomal_L13e4v47AH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AG]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
I [auth AG]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
H [auth AF]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
H [auth AF]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
F [auth AD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
F [auth AD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
E [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PA [auth BP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
D [auth AB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
MA [auth BM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
KA [auth BK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JA [auth BJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
IA [auth BI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
HA [auth BH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
FA [auth BF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
EA [auth BE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
EA [auth BE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
DA [auth BD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
DA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
C [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth AA]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
CA [auth BC]PF07650KH domain (KH_2)KH domainDomain
CA [auth BC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
Z [auth A1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
W [auth AW]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
U [auth AT]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
T [auth AS]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
T [auth AS]PF00467KOW motif (KOW)KOW motif- Family
R [auth AQ]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
P [auth AN]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
J [auth AH]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AG]50S ribosomal protein L11
H [auth AF]50S ribosomal protein L9
G [auth AE]50S ribosomal protein L6---
F [auth AD]50S ribosomal protein L5
E [auth AC]50S ribosomal protein L4
TA [auth BT]30S RIBOSOMAL PROTEIN S20
SA [auth BS]30S RIBOSOMAL PROTEIN S19
RA [auth BR]30S RIBOSOMAL PROTEIN S18
QA [auth BQ]30S RIBOSOMAL PROTEIN S17---
PA [auth BP]30S RIBOSOMAL PROTEIN S16
OA [auth BO]30S RIBOSOMAL PROTEIN S15---
NA [auth BN]30S RIBOSOMAL PROTEIN S14---
D [auth AB]50S ribosomal protein L3
MA [auth BM]30S RIBOSOMAL PROTEIN S13
LA [auth BL]30S RIBOSOMAL PROTEIN S12
KA [auth BK]30S RIBOSOMAL PROTEIN S11
JA [auth BJ]30S RIBOSOMAL PROTEIN S10
IA [auth BI]30S RIBOSOMAL PROTEIN S9
HA [auth BH]30S RIBOSOMAL PROTEIN S8
GA [auth BG]30S RIBOSOMAL PROTEIN S7
FA [auth BF]30S RIBOSOMAL PROTEIN S6
EA [auth BE]30S RIBOSOMAL PROTEIN S5
DA [auth BD]30S RIBOSOMAL PROTEIN S4
C [auth AA]50S ribosomal protein L2
CA [auth BC]30S RIBOSOMAL PROTEIN S3
16S RIBOSOMAL RNA---
AA [auth A4]50S ribosomal protein L36
Z [auth A1]50S ribosomal protein L33
Y [auth AZ]50S ribosomal protein L32
X [auth AX]50S ribosomal protein L30---
W [auth AW]50S ribosomal protein L29
V [auth AU]50S ribosomal protein L27
U [auth AT]50S ribosomal protein L25
T [auth AS]50S ribosomal protein L24
B [auth A9]5S ribosomal RNA---
S [auth AR]50S ribosomal protein L23---
R [auth AQ]50S ribosomal protein L22
Q [auth AO]50S ribosomal protein L20
P [auth AN]50S ribosomal protein L19
O [auth AM]50S ribosomal protein L18
N [auth AL]50S ribosomal protein L17---
M [auth AK]50S ribosomal protein L16---
L [auth AJ]50S ribosomal protein L15
K [auth AI]50S ribosomal protein L14---
J [auth AH]50S ribosomal protein L13
A [auth A0]23S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AG]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
I [auth AG]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth AG]IPR000911Ribosomal protein uL11Family
I [auth AG]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth AG]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth AG]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
I [auth AG]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
H [auth AF]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth AF]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth AF]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth AF]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth AF]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth AF]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth AF]IPR000244Large ribosomal subunit protein bL9Family
F [auth AD]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AD]IPR002132Large ribosomal subunit protein uL5Family
F [auth AD]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
E [auth AC]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth AC]IPR002136Large ribosomal subunit protein uL4Family
E [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
TA [auth BT]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
TA [auth BT]IPR002583Small ribosomal subunit protein bS20Family
SA [auth BS]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
SA [auth BS]IPR002222Small ribosomal subunit protein uS19Family
SA [auth BS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
SA [auth BS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
RA [auth BR]IPR001648Small ribosomal subunit protein bS18Family
RA [auth BR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RA [auth BR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
PA [auth BP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
PA [auth BP]IPR000307Small ribosomal subunit protein bS16Family
PA [auth BP]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
D [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AB]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
D [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AB]IPR000597Large ribosomal subunit protein uL3Family
MA [auth BM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
MA [auth BM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
MA [auth BM]IPR001892Small ribosomal subunit protein uS13Family
MA [auth BM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
MA [auth BM]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
LA [auth BL]IPR005679Ribosomal protein uS12, bacteriaFamily
LA [auth BL]IPR006032Small ribosomal subunit protein uS12Family
LA [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KA [auth BK]IPR001971Small ribosomal subunit protein uS11Family
KA [auth BK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KA [auth BK]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
KA [auth BK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JA [auth BJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
JA [auth BJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
JA [auth BJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
JA [auth BJ]IPR001848Small ribosomal subunit protein uS10Family
IA [auth BI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IA [auth BI]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
IA [auth BI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IA [auth BI]IPR000754Small ribosomal subunit protein uS9Family
IA [auth BI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
HA [auth BH]IPR000630Small ribosomal subunit protein uS8Family
HA [auth BH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
HA [auth BH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
GA [auth BG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
GA [auth BG]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
GA [auth BG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
GA [auth BG]IPR000235Small ribosomal subunit protein uS7Family
GA [auth BG]IPR023798Small ribosomal subunit protein uS7 domainDomain
FA [auth BF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
FA [auth BF]IPR000529Small ribosomal subunit protein bS6Family
FA [auth BF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
FA [auth BF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
FA [auth BF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
EA [auth BE]IPR000851Small ribosomal subunit protein uS5Family
EA [auth BE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
EA [auth BE]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
EA [auth BE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
EA [auth BE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EA [auth BE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
EA [auth BE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DA [auth BD]IPR002942RNA-binding S4 domainDomain
DA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
DA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DA [auth BD]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
C [auth AA]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
C [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AA]IPR002171Large ribosomal subunit protein uL2Family
CA [auth BC]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
CA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth BC]IPR004087K Homology domainDomain
CA [auth BC]IPR004044K Homology domain, type 2Domain
CA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth BC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
AA [auth A4]IPR000473Large ribosomal subunit protein bL36Family
AA [auth A4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
Z [auth A1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth A1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth A1]IPR001705Large ribosomal subunit protein bL33Family
Z [auth A1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
Y [auth AZ]IPR002677Large ribosomal subunit protein bL32Family
Y [auth AZ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth AZ]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
W [auth AW]IPR050063Universal ribosomal protein uL29Family
W [auth AW]IPR001854Large ribosomal subunit protein uL29Family
W [auth AW]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
W [auth AW]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
V [auth AU]IPR001684Large ribosomal subunit protein bL27Family
V [auth AU]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
U [auth AT]IPR020055Ribosomal protein bL25, short-formFamily
U [auth AT]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth AT]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
U [auth AT]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
U [auth AT]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
T [auth AS]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AS]IPR003256Large ribosomal subunit protein uL24Family
T [auth AS]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth AS]IPR005824KOWDomain
T [auth AS]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
R [auth AQ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AQ]IPR001063Large ribosomal subunit protein uL22Family
R [auth AQ]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
R [auth AQ]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AQ]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
Q [auth AO]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
Q [auth AO]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth AO]IPR005813Large ribosomal subunit protein bL20Family
P [auth AN]IPR001857Large ribosomal subunit protein bL19Family
P [auth AN]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth AN]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth AN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth AM]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
O [auth AM]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
L [auth AJ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth AJ]IPR030878Large ribosomal subunit protein uL15Family
L [auth AJ]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
L [auth AJ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth AJ]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
J [auth AH]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth AH]IPR005822Large ribosomal subunit protein uL13Family
J [auth AH]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
J [auth AH]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily