7E5M | pdb_00007e5m

crystal structure of trans assembled human TROP-2


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEUF08377e7e5mA1 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain of receptor-type protein tyrosine phosphatase (From Topology)T: Ferredoxin-like domain of receptor-type protein tyrosine phosphataseF: EUF08377ECOD (1.6)
AThyroglobulin_1e7e5mA2 A: few secondary structure elementsX: Thyroglobulin type-1 domain (From Topology)H: Thyroglobulin type-1 domain (From Topology)T: Thyroglobulin type-1 domainF: Thyroglobulin_1ECOD (1.6)
AF_UNCLASSIFIEDe7e5mA3 A: few secondary structure elementsX: N-terminal domain of EpCAM (From Topology)H: N-terminal domain of EpCAM (From Topology)T: N-terminal domain of EpCAMF: F_UNCLASSIFIEDECOD (1.6)
BEUF08377e7e5mB1 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain of receptor-type protein tyrosine phosphatase (From Topology)T: Ferredoxin-like domain of receptor-type protein tyrosine phosphataseF: EUF08377ECOD (1.6)
BThyroglobulin_1e7e5mB2 A: few secondary structure elementsX: Thyroglobulin type-1 domain (From Topology)H: Thyroglobulin type-1 domain (From Topology)T: Thyroglobulin type-1 domainF: Thyroglobulin_1ECOD (1.6)
BF_UNCLASSIFIEDe7e5mB3 A: few secondary structure elementsX: N-terminal domain of EpCAM (From Topology)H: N-terminal domain of EpCAM (From Topology)T: N-terminal domain of EpCAMF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21283EPCAM/Trop-2, C-terminal (EPCAM-Trop-2_C)EPCAM/Trop-2, C-terminalEpCAM (epithelial cell adhesion molecule, also known as Trop-1) and Trop-2 (also known as tumor-associated calcium signal transducer 2, TACSTD2) are transmembrane glycoproteins that belong to the tumour-associated calcium signal transducer (TACSTD) f ...Domain
A, B
PF00086Thyroglobulin type-1 repeat (Thyroglobulin_1)Thyroglobulin type-1 repeatThyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation [2]. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6. Domain
A, B
PF18635Epithelial cell adhesion molecule, N-terminal domain (EpCAM_N)Epithelial cell adhesion molecule, N-terminal domainEpCAM (epithelial cell adhesion molecule), a stem and carcinoma cell marker, is a cell surface protein involved in homotypic cell-cell adhesion via intercellular oligomerization and proliferative signalling via proteolytic cleavage. Structure analysi ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Tumor-associated calcium signal transducer 2-