Structure of archaeal translation factor aIF2beta from Methanobacterium thermoautrophicum
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | ~1.0mM aIF2beta, 50mM tris buffer, 300mM NaCl, 50uM ZnCl2, 1mM DTT, pH 6.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.0 | 1 atm | 310 | ||
| 2 | HNHA | ~1.0mM aIF2beta, 50mM tris buffer, 300mM NaCl, 50uM ZnCl2, 1mM DTT, pH 6.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.0 | 1 atm | 310 | ||
| 3 | HNCACB | ~1.0mM aIF2beta, 50mM tris buffer, 300mM NaCl, 50uM ZnCl2, 1mM DTT, pH 6.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.0 | 1 atm | 310 | ||
| 4 | CBCA(CO)NH | ~1.0mM aIF2beta, 50mM tris buffer, 300mM NaCl, 50uM ZnCl2, 1mM DTT, pH 6.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.0 | 1 atm | 310 | ||
| 5 | 3D_13C-separated_NOESY | ~1.0mM aIF2beta, 50mM tris buffer, 300mM NaCl, 50uM ZnCl2, 1mM DTT, pH 6.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | |||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| 2 | Varian | UNITYPLUS | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| The structures are based on 1142 NOE-derived constraints, 118 dihedral angle restraints, 39 hydrogen bonds and 58 NH residual dipolar couplings | XwinNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with acceptable covalent geometry |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (n/a) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 2.1 | Bruker |
| 2 | processing | Gifa | 4.31 | Delsuc |
| 3 | data analysis | XEASY | 1.3.13 | Wutrich |
| 4 | refinement | CNS | 0.9 | Brunger |
| 5 | structure solution | ARIA | 1.1 | Nilges |














