SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
2 | 3D CBCA(CO)NH | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
3 | 3D HNCACB | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
4 | 3D HNCO | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
5 | 3D HBHA(CO)NH | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
6 | 4D HCC(CO)NH-TOCSY | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
7 | 3D 1H-15N NOESY | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
8 | 3D 1H-13C NOESY aliphatic | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 | ||
9 | 3D 1H-13C NOESY aromatic | 20 mM ammonium acetate, 400 uM [U-13C; U-15N] kSs1a, 5 % D2O | 95% H2O/5% D2O | 5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 900 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | XEASY |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (highest molprobity percentile) |
Additional NMR Experimental Information | |
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Details | All 3D data except for NOESY data were acquired using non-uniform sampling and processed using maximum entropy reconstruction method. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | peak picking | XEASY | 3.2 | Bartels et al. |
2 | chemical shift assignment | XEASY | 3.2 | Bartels et al. |
3 | chemical shift calculation | TALOS | TALOS+ | Cornilescu, Delaglio and Bax |
4 | geometry optimization | TALOS | TALOS+ | Cornilescu, Delaglio and Bax |
5 | data analysis | CYANA | 3.0 | Guntert, Mumenthaler and Wuthrich |
6 | geometry optimization | CYANA | 3.0 | Guntert, Mumenthaler and Wuthrich |
7 | structure solution | CYANA | 3.0 | Guntert, Mumenthaler and Wuthrich |
8 | collection | TopSpin | 3.0 | Bruker Biospin |
9 | processing | TopSpin | 3.0 | Bruker Biospin |
10 | processing | Rowland_NMR_Toolkit | 3.0 | University of Connecticut |
11 | refinement | CYANA |