2A9K | pdb_00002a9k


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2A9K designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2A9K_GDP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2A9K_GDP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2A9K_GDP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2A9K_GDP_A_500 99% 43% 0.048 0.9810.95 1.26 1 500100%1
2A78_GDP_A_500 99% 49% 0.056 0.9870.87 1.11 - 400100%1
6P0O_GDP_B_201 99% 49% 0.063 0.990.82 1.14 1 300100%1
6P0K_GDP_B_504 98% 48% 0.066 0.9910.9 1.09 2 200100%1
6P0N_GDP_B_505 98% 48% 0.067 0.990.87 1.14 1 200100%1
8FJH_GDP_B_201 98% 50% 0.064 0.9840.84 1.07 - 400100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1