2GSM
TRD: TRIDECANE
TRD is a Ligand Of Interest in 2GSM designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
2GSM_TRD_A_5007 | 41% | 85% | 0.15 | 0.862 | 0.22 | 0.51 | - | - | 2 | 0 | 100% | 1 |
2GSM_TRD_A_5006 | 40% | 81% | 0.137 | 0.847 | 0.28 | 0.54 | - | - | 2 | 0 | 100% | 1 |
2GSM_TRD_C_6010 | 36% | 83% | 0.128 | 0.877 | 0.31 | 0.47 | - | - | 0 | 0 | 69% | 0.6923 |
2GSM_TRD_D_6008 | 31% | 88% | 0.139 | 0.888 | 0.25 | 0.41 | - | - | 0 | 0 | 54% | 0.5385 |
2GSM_TRD_B_5008 | 28% | 84% | 0.133 | 0.84 | 0.27 | 0.48 | - | - | 2 | 0 | 69% | 0.6923 |
2GSM_TRD_A_5005 | 28% | 79% | 0.149 | 0.797 | 0.28 | 0.57 | - | - | 2 | 0 | 100% | 1 |
2GSM_TRD_D_6007 | 21% | 79% | 0.19 | 0.797 | 0.24 | 0.62 | - | - | 0 | 0 | 100% | 1 |
2GSM_TRD_A_5010 | 12% | 80% | 0.206 | 0.729 | 0.27 | 0.56 | - | - | 0 | 0 | 100% | 1 |
2GSM_TRD_C_6006 | 10% | 78% | 0.173 | 0.681 | 0.27 | 0.61 | - | - | 1 | 0 | 100% | 1 |
2GSM_TRD_A_5009 | 10% | 86% | 0.19 | 0.772 | 0.32 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
2GSM_TRD_C_6009 | 6% | 83% | 0.185 | 0.662 | 0.3 | 0.48 | - | - | 0 | 0 | 69% | 0.6923 |
2GSM_TRD_C_6001 | 5% | 81% | 0.232 | 0.644 | 0.31 | 0.51 | - | - | 1 | 0 | 100% | 1 |
3DTU_TRD_D_7 | 47% | 81% | 0.148 | 0.885 | 0.24 | 0.58 | - | - | 2 | 0 | 100% | 1 |
6PW0_TRD_D_303 | 43% | 75% | 0.148 | 0.927 | 0.12 | 0.85 | - | - | 0 | 0 | 69% | 0.6923 |
6PW1_TRD_D_301 | 42% | 76% | 0.141 | 0.913 | 0.12 | 0.81 | - | - | 0 | 0 | 69% | 0.6923 |
3OMA_TRD_D_3 | 32% | 82% | 0.206 | 0.882 | 0.2 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3OMI_TRD_D_303 | 30% | 80% | 0.192 | 0.853 | 0.21 | 0.63 | - | - | 1 | 0 | 100% | 1 |
6GA3_TRD_A_303 | 59% | 75% | 0.109 | 0.891 | 0.12 | 0.84 | - | - | 0 | 0 | 100% | 1 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |