2IC5 | pdb_00002ic5


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2IC5 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2IC5_GDP_B_502Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2IC5_GDP_B_502Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2IC5_GDP_B_502Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2IC5_GDP_B_502 86% 45% 0.11 0.9791.2 0.93 2 100100%1
2C2H_GDP_A_1178 99% 45% 0.054 0.9831.08 1.06 1 300100%1
2G0N_GDP_A_501 83% 51% 0.113 0.9710.95 0.96 1 200100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1