Ligand validation:3VHM

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3VHM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3VHM_NAG_D_1125	53%	14%	0.109	0.868	1.38	2.42	2	3	5	0	100%	0.9333
3VHM_NAG_B_1125	52%	10%	0.108	0.863	1.73	2.59	2	7	2	0	100%	0.9333
3VHM_NAG_A_1125	43%	18%	0.116	0.838	1.83	1.73	4	4	2	0	100%	0.9333
3VHM_NAG_C_1125	32%	15%	0.141	0.814	1.22	2.54	1	4	6	0	100%	0.9333
5IRW_NAG_A_201	72%	56%	0.116	0.94	0.8	0.91	-	-	1	0	100%	0.9333
5IRU_NAG_A_201	71%	64%	0.115	0.934	0.71	0.68	-	-	0	0	100%	0.9333
5MYQ_NAG_A_302	65%	28%	0.111	0.913	0.82	2.05	-	1	0	0	100%	0.9333
3VHH_NAG_D_1125	53%	19%	0.142	0.901	1.33	2.11	3	4	3	0	100%	0.9333
1AVE_NAG_A_600	52%	29%	0.133	0.889	0.99	1.83	1	5	0	0	100%	0.6667
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.