Ligand validation:5MQL

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5MQL designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5MQL_UDP_D_500	40%	70%	0.214	0.926	0.4	0.74	-	1	1	0	100%	1
5MQL_UDP_C_302	40%	80%	0.232	0.944	0.39	0.44	-	-	1	0	100%	1
5MQL_UDP_B_301	35%	79%	0.239	0.929	0.41	0.45	-	-	0	0	100%	1
5MQL_UDP_A_301	34%	71%	0.255	0.939	0.53	0.59	-	-	0	0	100%	1
2ZI7_UDP_B_301	99%	16%	0.051	0.982	1.48	2.19	5	10	0	0	100%	1
2ZI6_UDP_A_4301	97%	26%	0.071	0.989	1.16	1.84	1	8	1	0	100%	1
7ZIA_UDP_A_301	96%	30%	0.077	0.988	1.15	1.65	3	6	0	0	100%	1
2ZIA_UDP_B_301	96%	27%	0.075	0.984	1.18	1.72	4	7	0	0	100%	1
4Q1E_UDP_B_303	96%	34%	0.078	0.985	1.14	1.46	3	4	1	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
2B69_UDP_A_900	100%	42%	0.032	0.992	1.03	1.21	2	4	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.